Gene PsycPRwf_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0629 
Symbol 
ID5204504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp758251 
End bp759534 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content47% 
IMG OID640598845 
Productsodium/hydrogen exchanger 
Protein accessionYP_001279534 
Protein GI148652441 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.844683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACATG CCACCGACTT AAGTTTGTTA GAAATCAGTG CGGTTTTTTT GAGCCTGACG 
GCTTTATTGG CCTACCTCAA TAAACGCTTT ATCGGCTTGC CTACCAGTAT TGGTGTCATG
GCTATCTCTT TAGTATTGTC TATTTTTGCC ATTTTTTTGG GTCTATTGGG CTTTGATAAG
CTTATTGATT ATGAAAAAGG GCTGCTTGCT GAGTTGGATT TTACCGAGGT TTTGCTCGAT
GGTATGCTGT CTATGCTGCT ATTCGCTGGG GCGCTACATA TTAATCTAGG AGACTTACGT
ACTTATAAGC TGCCCATTGC TATTTTGGCT TTATTTGGCA CGTTGGTGTC CTCGCTGCTG
ATTGCTGCGG CAGTCTATTT TACGCTGCCC CTATTTGGCT TTGAATTAAG CTTTATTTGG
TGCTTGTTAT TTGGTGCGCT TATCTCCCCT ACAGATCCCA TTGCGGTTAT GGGTATCCTA
GCCTCAGCTG GCGCTCCAAA GAGCTTAGAG ACGGTGATTG CCGGCGAGTC GCTATTTAAT
GATGGCGTTG GGGTAGTTAT TTTTGTGCTG CTACTGGGTA TTTTAAACAG TGGCGACATT
CCCACTACCG GATACATACT GCACTCTTTA GCGGTAGAGG CTGGCGGCGG TATTTTATTT
GGCCTCATAT TGGGCGCAAT CTTGTACTAT CTGCTCAAAA GTATCAATAG CTATCAAGAG
GAGGTGCTGA TCACCTTGGC TGGGGTACTG GGTGGGTATG CGCTGGCCAG TCACTATCAC
CTATCGGGCC CACTGGCCAT GGTAATGATG GGTCTGATGA TCGGTAACAA GGGCCGCGCC
TATGCCATGA GTGACCAGAC CCGCCATTAT GTGGATCTGT TTTGGGAGCT GGTCGATGAG
ATTTTAAATG CCATTTTATT TGTGCTCATT GGCCTAGAAG TGGTGGTGAT TGCCTACTCA
GGTAATTTAT TTATGGCCGC AGCTTTGGCC ATTGTGATTG CCCTATTGGC GCGTTATATC
GTGGTGGGTT TGACCACAAA AACCTTTAGA AAGCAGCTGG ATTTGCCCAC TGGTGCTTGG
AAAGTACTGA CTTGGGGCGG TCTGCGTGGG GGGATTTCAG TGGCCTTAGT GCTGCAGCTG
CCGTCAAGCC CTGAACGTGA TGTGCTGCTT GCCCTCACCT ACGCCATTGT GATTTTCTCA
ATCTTAGTTC AGGGCTTAAC GATTGGTAAG GTGGCCAAAA GCATTGCGCC TAGCAAACAG
AAGGTATTAG GGCCAGGTGC TTAA
 
Protein sequence
MQHATDLSLL EISAVFLSLT ALLAYLNKRF IGLPTSIGVM AISLVLSIFA IFLGLLGFDK 
LIDYEKGLLA ELDFTEVLLD GMLSMLLFAG ALHINLGDLR TYKLPIAILA LFGTLVSSLL
IAAAVYFTLP LFGFELSFIW CLLFGALISP TDPIAVMGIL ASAGAPKSLE TVIAGESLFN
DGVGVVIFVL LLGILNSGDI PTTGYILHSL AVEAGGGILF GLILGAILYY LLKSINSYQE
EVLITLAGVL GGYALASHYH LSGPLAMVMM GLMIGNKGRA YAMSDQTRHY VDLFWELVDE
ILNAILFVLI GLEVVVIAYS GNLFMAAALA IVIALLARYI VVGLTTKTFR KQLDLPTGAW
KVLTWGGLRG GISVALVLQL PSSPERDVLL ALTYAIVIFS ILVQGLTIGK VAKSIAPSKQ
KVLGPGA