Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0574 |
Symbol | |
ID | 5206086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 690651 |
End bp | 691046 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640598789 |
Product | putative endoribonuclease L-PSP |
Protein accession | YP_001279479 |
Protein GI | 148652386 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000328511 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00876549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTC AAACCATTCA TACTGATAAA GCCCCTGCAG CCGTTGGCGC CTATTCACAA GCGGTAAAAA TCCCATCAAC CGGTGGCAGC CTGGTATACA TCTCAGGTCA ACTGGGCTTT GATCCTGAAA CTATGGAGCT GCGTGAAGGC TTTGATGCCC AAGCTAAGCA AGTTATGGAC AACATTGAAG CCATCTGTGA AGCTGCTGGC GGCAAATTAA GCGATGTGGT TAAGTTTAAC GTATCACTGA CTGATTTAAA TGACTTTGCA GCGCTAAACG CAGTATTCGC TGAGCGTCTG GCAGAACCGT ATCCTGCTCG TGCTGCGGTA CAAGTGGCAG CACTTCCTAA AGGCGGCATC GTTGAAATTG AGTCTATCTT ATTTATCGAA GACTAA
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Protein sequence | MARQTIHTDK APAAVGAYSQ AVKIPSTGGS LVYISGQLGF DPETMELREG FDAQAKQVMD NIEAICEAAG GKLSDVVKFN VSLTDLNDFA ALNAVFAERL AEPYPARAAV QVAALPKGGI VEIESILFIE D
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