Gene PsycPRwf_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0563 
Symbol 
ID5206160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp675528 
End bp676490 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID640598778 
Producthypothetical protein 
Protein accessionYP_001279468 
Protein GI148652375 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0031589 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAAAA TAAAGGATGC GGGCCAATTA CCGGCCATAG GATTGGTCAT TGGGTGCGTC 
ATTTTTGGAC TAGGCAGTCT AATTGTGGCT CATGTGGATG TGGGCGGCTA TGCCATGGCC
TTTTGGCGAT TGGCCATATC CGGAATAGTG TTTACCTTAT TGGCCGCTGT GTTCGGTCAA
AAAATGCCAG TCGACAAAGG CAGTCAAGCC AATAAAAAAG CATTTATATT TGCGCTGCTG
TCGGGGGTGT TTTTAGGGTT TGATTTGGCA CTGTGGCACG AAAGCATTTA TGCAGTGGGC
CCAGGCATAT CAACCTTATT AAATAGCTTA CAGATTTTCT TTTTAGCAGC GCTTGGGTTT
TTGTTATTTA AAGAGCGTCA AACCATAATT CAGCTCATCA GCCTCATCAT TGCGCTGGCA
GGCGTCGTGT TTATTGCTAG CCCTGAGTTT GCCAATAACA ATCATGCCGC TTACGGGTTT
ATCACCGGCA TCGTCTCAGC GGCTATGTTA GCGGCCTCAA TGACTTTTAT CCGCTTAACT
CATCAAAACG CGCCCACACC GATTTTTATC TTGATGCAGC GTATTAGTAT TGGCGGCAGT
CTGGCAATGC TTATCCCCAT GTTTTTATTT GATGCTGGCA AAATACTGCC CAACTCTTTG
GCGGAGATAG GCTGGATATT GATATATGGA ACGGTGATGC AGTGCTTGGC ATGGGGACTT
ATCGCCTACT CAATCCCTAA GCTGTCTTTG GCATTAACCG GACTGCTGCT GCTGACAGAG
CCTGTGGCTG CGTTATTTAT TGATTACTTT TGGTTAGATA AGCCAATCAA TACCATCCAA
TGGACGGGAG CTGCCCTGAC CATGTTTGCC ATTTATTTAG GATCATTAAA GCCCAAGCCC
TTTAATGAGA CACTCAAGCT GCGCCGCTAT CGATTCTTTG CAAAGTTTTA TCGGCGCCGT
TAG
 
Protein sequence
MIKIKDAGQL PAIGLVIGCV IFGLGSLIVA HVDVGGYAMA FWRLAISGIV FTLLAAVFGQ 
KMPVDKGSQA NKKAFIFALL SGVFLGFDLA LWHESIYAVG PGISTLLNSL QIFFLAALGF
LLFKERQTII QLISLIIALA GVVFIASPEF ANNNHAAYGF ITGIVSAAML AASMTFIRLT
HQNAPTPIFI LMQRISIGGS LAMLIPMFLF DAGKILPNSL AEIGWILIYG TVMQCLAWGL
IAYSIPKLSL ALTGLLLLTE PVAALFIDYF WLDKPINTIQ WTGAALTMFA IYLGSLKPKP
FNETLKLRRY RFFAKFYRRR