Gene PsycPRwf_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0511 
Symbol 
ID5205500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp609840 
End bp610721 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content48% 
IMG OID640598726 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001279416 
Protein GI148652323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CTTATCGCAT AACGCCAATC GCCAGCTCTG GTACAGGCAG CCGGTCAATC 
GTCAGCCCAC GCAGTTGGTT ATTCGTCCCC GCCACTTATC CAGAGCGATT TAATAAAGCA
TTAAACAGTG GGGCGGAAGC GGTCATTATT GATTTAGAAG ATGCTGTGGC CTTGGACCAA
AAGCGCCAGG CACGTGAGAA TATAGATGAG TTTTTTTTAC AATTAGAGTC TGATAATGTG
AGAGCCAGTG TTTGGCTGCG CCTTAATAAT GATGAGCAAT TGGCTGAGGA TTTAGTGCTA
TGTAAGCAGC TGACCTCAAG TAAGTTGGTG TCCGGCGTGC TGCTGCCCAA GCTGACCTCA
AGTGCGCCAG TCACTCAAGT ATGGGAGCAA ACGGGGTTAA CTGTTGTGGG GCAGATTGAG
TCAGCTCTAG GATTAAGTCA GTTAAACCAA ATCACCCAAA GCAAGGGGCT TATGGCGCTA
AGCTATGGCC GCCTTGATAT TAGAAATGAG TTGTCATTAC GCGCAGGCAG TCAAGCTGAG
CAAGACTTTT TTCGCCAGCT GCGCGTCACT TTATTATTAG CCAGTAAAGC CAATGGATTA
CAAGCCCCGA TCGAGAGTAT TTATGCCGAT TTTAAAGATG AGGCAGGCAT GCAAATGGCG
GCTGAATACG CTTCTGACTT AGGCTTCTCA GGTATGCTGT GTATCCACCC CAAGCAGGTG
GCCTTAGTAA ATACAGCCTT TACCCCCAGC CAAGCTCAGC TTGAGTTTGC CCAACAAGTA
ATCGACTATT ATCAGCGCAC TGGTGAGAGC ATCTTTGCCA TAGACGGGGT CATGGTAGAT
TTACCGGTGA TTTTGCAGTG TCAAACACTG TTGTCTGCTT AG
 
Protein sequence
MSDSYRITPI ASSGTGSRSI VSPRSWLFVP ATYPERFNKA LNSGAEAVII DLEDAVALDQ 
KRQARENIDE FFLQLESDNV RASVWLRLNN DEQLAEDLVL CKQLTSSKLV SGVLLPKLTS
SAPVTQVWEQ TGLTVVGQIE SALGLSQLNQ ITQSKGLMAL SYGRLDIRNE LSLRAGSQAE
QDFFRQLRVT LLLASKANGL QAPIESIYAD FKDEAGMQMA AEYASDLGFS GMLCIHPKQV
ALVNTAFTPS QAQLEFAQQV IDYYQRTGES IFAIDGVMVD LPVILQCQTL LSA