Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0511 |
Symbol | |
ID | 5205500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 609840 |
End bp | 610721 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598726 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_001279416 |
Protein GI | 148652323 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT CTTATCGCAT AACGCCAATC GCCAGCTCTG GTACAGGCAG CCGGTCAATC GTCAGCCCAC GCAGTTGGTT ATTCGTCCCC GCCACTTATC CAGAGCGATT TAATAAAGCA TTAAACAGTG GGGCGGAAGC GGTCATTATT GATTTAGAAG ATGCTGTGGC CTTGGACCAA AAGCGCCAGG CACGTGAGAA TATAGATGAG TTTTTTTTAC AATTAGAGTC TGATAATGTG AGAGCCAGTG TTTGGCTGCG CCTTAATAAT GATGAGCAAT TGGCTGAGGA TTTAGTGCTA TGTAAGCAGC TGACCTCAAG TAAGTTGGTG TCCGGCGTGC TGCTGCCCAA GCTGACCTCA AGTGCGCCAG TCACTCAAGT ATGGGAGCAA ACGGGGTTAA CTGTTGTGGG GCAGATTGAG TCAGCTCTAG GATTAAGTCA GTTAAACCAA ATCACCCAAA GCAAGGGGCT TATGGCGCTA AGCTATGGCC GCCTTGATAT TAGAAATGAG TTGTCATTAC GCGCAGGCAG TCAAGCTGAG CAAGACTTTT TTCGCCAGCT GCGCGTCACT TTATTATTAG CCAGTAAAGC CAATGGATTA CAAGCCCCGA TCGAGAGTAT TTATGCCGAT TTTAAAGATG AGGCAGGCAT GCAAATGGCG GCTGAATACG CTTCTGACTT AGGCTTCTCA GGTATGCTGT GTATCCACCC CAAGCAGGTG GCCTTAGTAA ATACAGCCTT TACCCCCAGC CAAGCTCAGC TTGAGTTTGC CCAACAAGTA ATCGACTATT ATCAGCGCAC TGGTGAGAGC ATCTTTGCCA TAGACGGGGT CATGGTAGAT TTACCGGTGA TTTTGCAGTG TCAAACACTG TTGTCTGCTT AG
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Protein sequence | MSDSYRITPI ASSGTGSRSI VSPRSWLFVP ATYPERFNKA LNSGAEAVII DLEDAVALDQ KRQARENIDE FFLQLESDNV RASVWLRLNN DEQLAEDLVL CKQLTSSKLV SGVLLPKLTS SAPVTQVWEQ TGLTVVGQIE SALGLSQLNQ ITQSKGLMAL SYGRLDIRNE LSLRAGSQAE QDFFRQLRVT LLLASKANGL QAPIESIYAD FKDEAGMQMA AEYASDLGFS GMLCIHPKQV ALVNTAFTPS QAQLEFAQQV IDYYQRTGES IFAIDGVMVD LPVILQCQTL LSA
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