| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0508 |
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| Symbol | |
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| ID | 5205398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 604746 |
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| End bp | 606080 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598723 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001279413 |
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| Protein GI | 148652320 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000010598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACG AGAAGTATAA TGCCCTGAAT AAGCCAACTC AGACGCCGCC GCCCCATCTA
TCTGCGGATA CGCCTCAACA CAAAGCGCCT GTTGATAAAG AGCTGTCGCC TAACCAAGCG
GCGGCCTCTC ATCATAAAGA CAGCGAAGCT GCATCAACGC CCGCACCTGA TTCAGCGCCT
GCCACTAAGT CAGCGGCTGC GGATAACGAT ACCCCCATGC CACCCAAAGA GCCTATTGCT
TCAGACTCTG GTTGGTCACC GAAAAAAAAA TCGATGCTTC ATCTTATTTT ATTTGTAGCC
TTGATTGTGA CAGGTGTCCT GCTCATCTTA TATGCGTGGA AACTGCCCCC ATTCACGCCT
ACGGTACAGC ATACCAACAA TGCCTTTGTG AAAGGTCGCA CCACCATAAT TAGCCCACAA
GTTTCTGGTT ATGTGACCCA AGTGGCAGTA CAAGATTTTG CTAAAGTTAG CGCAGGCGAC
TTATTGATAA AAATTGATGA TCGTAACTTT CAGCAGCAAT TAGAACAAGC CGCAGCCAAT
ATCCAAGTGG CCATCACCAA CCGCGCTAAC AACGAGCAAG ATGCCCAAGT GAGTCAAGCT
CAGATAGATG CACGCTTGGC CGATTTACAC AGTGCTCAAG CACGTGTGCT AAGTGCCGAG
CAAGATGTAC AACGTTACCA AGACTTAGAA GCGATGACGA TTGGCGCTGT ATCAAAAGCT
GAAGTTGCGC ATACCCAAGC CCAGCTTGCT CAGGCAAAAG CAGGCGTTGA ACAAGCGCAG
GCTAATTTAG AAGCAGCCCA GCAAGCGCGC CAAAAGACCA TCGGCAGCCT ATCGTCACTT
GATGCCAATA TCAAAAGTGC ACAAGCTGTA GCCAAGCAGG CACAAATTAA TTTGGACAAT
ACCATTATTA CCGCGCCTGA ATCTGGTCAG CTTAGCCAAT TGAGCGTTAA AATCGGTCAA
TATGTCACGC CCGGCACACA GCTGATGTAT ATTGTGCCAA AAGGTGTCTG GGTGATTGCC
AACTTTAAAG AAACTCAGGT CGCTAATATC GCGATCGGTG ATCGAGCGAC CATACAGGTT
GATGCCTTAG GGGGTAAGAC CTTTACCGGA CGTGTCAGTA ATCTGTCACC GGCTACCGGT
AGCGAGCTCA CTACCGGAAG TGCCAATCCG GCTACCGGCA ACTACATTAA GGTGGCGCAG
CGTATTCCGG TGCGCATTGA TTTAGATGCC AATCAACCTG ATATCGTAAG ATTACGTCCG
GGTATGTCAG TAGAGGCCGA TGTCGATACC AAGACACACG CTGGGCCTCA TACCAAGATA
ACCGCCAGTA AATAG
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| Protein sequence | MSDEKYNALN KPTQTPPPHL SADTPQHKAP VDKELSPNQA AASHHKDSEA ASTPAPDSAP
ATKSAAADND TPMPPKEPIA SDSGWSPKKK SMLHLILFVA LIVTGVLLIL YAWKLPPFTP
TVQHTNNAFV KGRTTIISPQ VSGYVTQVAV QDFAKVSAGD LLIKIDDRNF QQQLEQAAAN
IQVAITNRAN NEQDAQVSQA QIDARLADLH SAQARVLSAE QDVQRYQDLE AMTIGAVSKA
EVAHTQAQLA QAKAGVEQAQ ANLEAAQQAR QKTIGSLSSL DANIKSAQAV AKQAQINLDN
TIITAPESGQ LSQLSVKIGQ YVTPGTQLMY IVPKGVWVIA NFKETQVANI AIGDRATIQV
DALGGKTFTG RVSNLSPATG SELTTGSANP ATGNYIKVAQ RIPVRIDLDA NQPDIVRLRP
GMSVEADVDT KTHAGPHTKI TASK
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