Gene PsycPRwf_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0406 
Symbol 
ID5206467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp498216 
End bp498761 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID640598620 
Productlactoylglutathione lyase 
Protein accessionYP_001279311 
Protein GI148652218 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR00068] lactoylglutathione lyase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0941783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0136284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTA ATTATGTTGA CCAACCCAAA GGCTCCGTTG TGGTAGATGG CGTACAGCCG 
ATTGCTGCGG CAACCACAGG TTATACTTTT AACCACACCA TGCTACGGGT TAAAGACCCC
AAAGCGTCGC TTGAATTTTA TACCGGTGTG CTGGGTATGA CGCTTTTGAC GGTAAAAAAA
TTCCCAGAAA TGGCGTTTGA TTTGTACTTT TTGGCCAAAT TAACCGATGA CGAGCGTGCC
AATTTGCCAG AAAACGAAGA ATTAGCGATT TATACTTTCC GTCAACGTGG TATTTTAGAG
TTGACCCATA ACTATGGCAC CGAGACCCAG CCAGGACGTA TTTATCATGA CGGCAATGCT
GAGCCACAAG GTTTTGGTCA CATTTGCTTT AGCGTCCCTG ACTTAACTGC CGCCGTAGAG
TGGTTTGATA AAAACAACGT AGAGTTCAAA AAACGCCCAG AAGAGGGAAA AATGAAGAAC
GTGGTGTTTA TCAAAGATGT TGATGGTTAC TGGATTGAAG TGGTACAAGC TGATCTTATG
GGTTAA
 
Protein sequence
MSINYVDQPK GSVVVDGVQP IAAATTGYTF NHTMLRVKDP KASLEFYTGV LGMTLLTVKK 
FPEMAFDLYF LAKLTDDERA NLPENEELAI YTFRQRGILE LTHNYGTETQ PGRIYHDGNA
EPQGFGHICF SVPDLTAAVE WFDKNNVEFK KRPEEGKMKN VVFIKDVDGY WIEVVQADLM
G