Gene PsycPRwf_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0368 
Symbol 
ID5205827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp440960 
End bp441724 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID640598580 
Producthypothetical protein 
Protein accessionYP_001279273 
Protein GI148652180 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.003766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000586302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTTA TGGACTTTTC CTTAACCCTT GAAGTAATTT TAATGTTAAC TGCCGTAGCA 
GCCGTGGCAG GATTTATTGA TGCCATTGCC GGTGGCGGCG GACTGCTCAC CATTCCCGCT
ATGTTATTGG CCAATATCCC CCCAGTTATG ACTTTGGGCA CCAATAAGCT TCAGGCAGCC
TCTGGGGCAC TGACCGCCTC CATTACTATG ATAAAAAAAG GCGTGGTGAA GCCAGCCACT
ATGAAAATGG CCATTGCCGG CGCTTTTTTT GGCTCGGTAT TGGGCACCAT CGCTGTGCAG
ATGTCACCAC CGGATATGCT TGAAAAAATC ATTCCATTTT TGATTGCCGC TATTGGGATT
TATACCTTAT TTGCGCCAAG CTTGGGGGAT GTGGAGGCTG AGCCTAGAAT TAAGGAGACC
ACATGGCAGC GTGTGGTGGC ACCCTTGATA GGCTTTTATG ATGGCTATGT CGGCCCGGGC
ACCGGTATGT TTTTTGCGCT AGGTAATGTG GCACTGCGGG GTAGAGCCAT TATTGCGGCC
ACAGGAACTG CCAAAGTGCT TAATTTATCG ACCAACATTG CCTCGCTGAT TTTCTTTATC
TTAGGCGGTA ATGTGCTGTG GAAAGTGGGT CTGGCGATGA TGGTGGGTCA AACCATAGGC
GCTTATGCTG GCTCTCACAT GGTGGTCAAA GGCGGTAGCA AGCTGATTCG GCCGGTTATT
GTACTGGTCT GTCTAGCCAT GGTGACTAAG TATGTGATGG GTTGA
 
Protein sequence
MSFMDFSLTL EVILMLTAVA AVAGFIDAIA GGGGLLTIPA MLLANIPPVM TLGTNKLQAA 
SGALTASITM IKKGVVKPAT MKMAIAGAFF GSVLGTIAVQ MSPPDMLEKI IPFLIAAIGI
YTLFAPSLGD VEAEPRIKET TWQRVVAPLI GFYDGYVGPG TGMFFALGNV ALRGRAIIAA
TGTAKVLNLS TNIASLIFFI LGGNVLWKVG LAMMVGQTIG AYAGSHMVVK GGSKLIRPVI
VLVCLAMVTK YVMG