Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0368 |
Symbol | |
ID | 5205827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 440960 |
End bp | 441724 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598580 |
Product | hypothetical protein |
Protein accession | YP_001279273 |
Protein GI | 148652180 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.003766 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000586302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCATTTA TGGACTTTTC CTTAACCCTT GAAGTAATTT TAATGTTAAC TGCCGTAGCA GCCGTGGCAG GATTTATTGA TGCCATTGCC GGTGGCGGCG GACTGCTCAC CATTCCCGCT ATGTTATTGG CCAATATCCC CCCAGTTATG ACTTTGGGCA CCAATAAGCT TCAGGCAGCC TCTGGGGCAC TGACCGCCTC CATTACTATG ATAAAAAAAG GCGTGGTGAA GCCAGCCACT ATGAAAATGG CCATTGCCGG CGCTTTTTTT GGCTCGGTAT TGGGCACCAT CGCTGTGCAG ATGTCACCAC CGGATATGCT TGAAAAAATC ATTCCATTTT TGATTGCCGC TATTGGGATT TATACCTTAT TTGCGCCAAG CTTGGGGGAT GTGGAGGCTG AGCCTAGAAT TAAGGAGACC ACATGGCAGC GTGTGGTGGC ACCCTTGATA GGCTTTTATG ATGGCTATGT CGGCCCGGGC ACCGGTATGT TTTTTGCGCT AGGTAATGTG GCACTGCGGG GTAGAGCCAT TATTGCGGCC ACAGGAACTG CCAAAGTGCT TAATTTATCG ACCAACATTG CCTCGCTGAT TTTCTTTATC TTAGGCGGTA ATGTGCTGTG GAAAGTGGGT CTGGCGATGA TGGTGGGTCA AACCATAGGC GCTTATGCTG GCTCTCACAT GGTGGTCAAA GGCGGTAGCA AGCTGATTCG GCCGGTTATT GTACTGGTCT GTCTAGCCAT GGTGACTAAG TATGTGATGG GTTGA
|
Protein sequence | MSFMDFSLTL EVILMLTAVA AVAGFIDAIA GGGGLLTIPA MLLANIPPVM TLGTNKLQAA SGALTASITM IKKGVVKPAT MKMAIAGAFF GSVLGTIAVQ MSPPDMLEKI IPFLIAAIGI YTLFAPSLGD VEAEPRIKET TWQRVVAPLI GFYDGYVGPG TGMFFALGNV ALRGRAIIAA TGTAKVLNLS TNIASLIFFI LGGNVLWKVG LAMMVGQTIG AYAGSHMVVK GGSKLIRPVI VLVCLAMVTK YVMG
|
| |