Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0339 |
Symbol | |
ID | 5206665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 410010 |
End bp | 410672 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640598551 |
Product | RDD domain-containing protein |
Protein accession | YP_001279244 |
Protein GI | 148652151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000257721 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000478275 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAAC AACGTCGTTC TAACCTGTCT AAACCTCCCA CAGCATCCTC TGAAGAGGGG TTACGTCCTA CAGGCATTGA GGGAGTTAGC GTCTCAGGTG AGCCTGAAAT CGCCAAAGCA GCCACTCGTG TTATTGCCAT TGTCTATGAT GGCATGTTGA TCTTGGCCTT GTTGTTTTTG GTGGGGACGG TATTGACGGT GCTTGGCACT ATGATGACGA TGGAGACGGG GGTGACCTCA GATCAGGCGC AGACTTTGCC TGCGTGGTAT CGCAATCTGG TGCTAACGCC AGCCTTTATT GTGACTTTAA TTGGCTTTTA TGGGCTATTT TGGCGTAGAG CAGGGCAGAC GCTAGGCATG CAGACGTGGC GCTTAAAGAC GGTCGATAGC CAAGGTCAAC TGCTGACTTG GTCTAAGACG GTGAAGCGTA TTTTAGCAGC CTGCGTGGTA CCTGTGATAT GCGGCATGAT TGGCTATGCT TTTCATAATT CACGTTCAGC GATGCTGTTT AGTGCCTTTT TTGGTCTGAT GTTTAATTAC TTGTTTTGCC TGTTTAATCG AGGTGGGTTG GCGGTACACG ACATGCTCTC TGGTACTGTG ACCCTAAAAA TGCCTAAAAT CCATCACGAA GGCTTATTTA AATCGCTTAG AAAGAAAAAA TAG
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Protein sequence | MSKQRRSNLS KPPTASSEEG LRPTGIEGVS VSGEPEIAKA ATRVIAIVYD GMLILALLFL VGTVLTVLGT MMTMETGVTS DQAQTLPAWY RNLVLTPAFI VTLIGFYGLF WRRAGQTLGM QTWRLKTVDS QGQLLTWSKT VKRILAACVV PVICGMIGYA FHNSRSAMLF SAFFGLMFNY LFCLFNRGGL AVHDMLSGTV TLKMPKIHHE GLFKSLRKKK
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