| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0312 |
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| Symbol | |
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| ID | 5204521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 372794 |
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| End bp | 373414 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640598522 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001279217 |
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| Protein GI | 148652124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000705799 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00414604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAACAGTT TACTTAGTAG CCATACCACC TTGATTATTA TCATCACCGT TATTGTCAGC
TTATTGGCCT GGCAAAACAA AGAGATGATG AGCAAGCTTA TTTTTTATCC ACCTGCGGTG
AATAAAGGCG AATGGTATCG CTTTATTACC CACGGCTTCG TTCATGCTGA CAGTACTCAC
CTACTGTTTA ACATGTTTAC CTTATATTTC TTTGGCCGCG CAGTAGAACG CTTTTTTAAT
CAATTTTTAG GTGGTTTTGG GTTTGTTGCT GTGTATTTAG GCGCCATTAT CGTGGCCATG
ATACCCAGCT ATTTGCAGCA CAAAAATGAT CCACGCTATC GCAGTCTTGG CGCTTCGGGC
GGGGTATCGG CCATTTTATT CTCCTTCATA TTAATGGCAC CTTGGAGCAT GCTGTATTTG
TTTGCTATTG TGCCCATCCC AGCCATCGTA TTTGCCATCG CTTATGTTGG CTATAGCATT
TATGCCAACA ACAAGGGCAA CTCAAACATC AATCATCTGG CTCATTTATG GGGCGGTGCC
TTTGGTGTGG TGGCCACCAT TTTATTATCG CCCAGTGTTT TGGGTCACTT CTTTAATGCC
TTGATGCATC CAAGTTTTTA G
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| Protein sequence | MNSLLSSHTT LIIIITVIVS LLAWQNKEMM SKLIFYPPAV NKGEWYRFIT HGFVHADSTH
LLFNMFTLYF FGRAVERFFN QFLGGFGFVA VYLGAIIVAM IPSYLQHKND PRYRSLGASG
GVSAILFSFI LMAPWSMLYL FAIVPIPAIV FAIAYVGYSI YANNKGNSNI NHLAHLWGGA
FGVVATILLS PSVLGHFFNA LMHPSF
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