Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0303 |
Symbol | |
ID | 5205254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 360701 |
End bp | 361909 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598513 |
Product | major facilitator transporter |
Protein accession | YP_001279208 |
Protein GI | 148652115 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.421003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACTG ACTCTTCCAC CCCCTTTAAC TCTCTTCAAG CACCTTCTTT TGTACTAAAA ATGACCGCCA TGCTTATTGG CGTCTTTGCG TTTTTGCAGG TGTACTCTAT TCAGTCAATT TTGCCGGTGC TGATGCTTGA TTTTAAGGCC AGCGAAGTGC AAGTCGGTAT GGCGGTAGGC GCCACAGTGA TGGCCGTGGC AATCATGTCG CCCTTTTTGG GCATGCTCTC TGACGCGGTG GGACGCAAAT CTATTATTGT CGGTGCGTTG TTATTTTTGG CGGTACCAAC AGCGCTGATT GCGCACAGTC AGAGTATAGA GAGTCTGACC ATTTGGCGCT TTTTGCAAGG ATTATCGGTG CCGGGCATTA CAGTGGTGAC CATCGCCTAT TTGGGCGAGG AATTTAAAGG TCATGCGGTT GCAGAATTAA TGTCTTATTA TGTCTCAGGA TCGGTACTGG GCGGATTTTT AGGGCGTTTT ATTTTGGGCC ATCTGCATGA GTGGGTTGGC TGGCGTATTG CTTATTATTT TATGGCTGTA TTAACTGTGG CCGGCGCGCT TTGGGTGGCT AAGACCTTAC CTGCCTCACA GCATTTCGTT GCCAGCCCTA AGTTTCGCAC CTCGCTGACC ACTTTGGGCA ATCACTTGAC CAACCGCTAT GTGGTCTCCG CCTCACTGCT TGGGTTTTGT GTGTTATTCT CACTGGTAGG CTGTTTTACC TTTATTAATC TGCATTTGGC ACAGCAGCCC TACCATTTAA CTACCGGACA GCTGGCCAAC ATCTTTGCGG TGTATTTAAT TGGTGTCATC ATTACCCCTT TATCTACCAA GCTGTTGCAG CGCTTTGGCT CAGTGCGCAC CATCATTACC GCGGTATTGA TGTCTATGCT GGGCGTGCTC ATTACGCTTA GCGGACCGCT GTGGCTGATT TTAATTGGTA TTAGCATTAT GTCATCGGGG GTGTTCATTA CCCAGTCAGC GACCATAGGC TATATCGCCA CCAATGTGCA CCATGGCCGT TCATTGGCCT CAGGTATCTA CTATATGGGC TATTACGCTG GCGGCACCGC AGGGGCCTGG TTATGTGGTC TGGCTTATGC TTATGGCCAA TGGCACTTTA CGGTCTGGGT GTTATTGACG GTACAAGTAA TCGCCTTATT AATTGCCTCT ATTGGCATGG TAAAAACCTC AAATAACCCG GCAGATTAA
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Protein sequence | MQTDSSTPFN SLQAPSFVLK MTAMLIGVFA FLQVYSIQSI LPVLMLDFKA SEVQVGMAVG ATVMAVAIMS PFLGMLSDAV GRKSIIVGAL LFLAVPTALI AHSQSIESLT IWRFLQGLSV PGITVVTIAY LGEEFKGHAV AELMSYYVSG SVLGGFLGRF ILGHLHEWVG WRIAYYFMAV LTVAGALWVA KTLPASQHFV ASPKFRTSLT TLGNHLTNRY VVSASLLGFC VLFSLVGCFT FINLHLAQQP YHLTTGQLAN IFAVYLIGVI ITPLSTKLLQ RFGSVRTIIT AVLMSMLGVL ITLSGPLWLI LIGISIMSSG VFITQSATIG YIATNVHHGR SLASGIYYMG YYAGGTAGAW LCGLAYAYGQ WHFTVWVLLT VQVIALLIAS IGMVKTSNNP AD
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