| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0279 |
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| Symbol | |
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| ID | 5204894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 331231 |
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| End bp | 333099 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640598489 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001279184 |
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| Protein GI | 148652091 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0772633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT TTACTATCAA TCTTATATTC GTTGGGGCTT CTTTTCTGTT GTACTTTGGC
ATTGCCATTT GGGCGCGTGC AGGCTCTACA AAAGAATTCT ATGTGGCCGG TGGTGGCGTT
CACCCTGTGT TAAACGGTAT GGCAACGGGT GCTGACTGGA TGAGTGCGGC GTCTTTTATC
TCTATGGCAG GCCTATTGGC AGCCGGCGGT TATGGTGCCT CTTCCTATCT GATGGGCTGG
ACCGGCGGCT ACGTGTTACT AGCCATGTTA CTTGCGCCTT ATTTGCGCAA ATTCGGTAAA
TACACCGTAC CAGATTTTAT CGGCGACCGC TTCTATTCAA AAACGGCGGC TTTAGTGGCT
GTGGCCTGTT TGATTATTGC CTCTACCACT TATGTGATCG GTCAGATGAC CGGTGCCGGC
GTTGCCTTCT CACGCTTTTT GGAAGTGGAC AATACCACCG GGCTTATTAT CGCCGCAGTT
GTGGTTTTCT TCTACGCTGT ATTAGGTGGT ATGAAGGGCA TTACCTACAC TCAGGTGGCG
CAGTACGTGG TACTGATTAT CGCCTACACC ATTCCTGCTG TCTTTATCTC ACTTGAATTA
ACCGGCAACC CGATTCCTGG TCTAGGTATG TTCTCAAACC ATACTGAATC TGGCATTCCG
CTACTGACTA AACTTGATCA AGTGGTCACA GACTTAGGCT TTACCGCCTA TACCGCCGAT
GTACCTAGCA AGCTTAATAT GGTGCTATTC ACCTTATCGC TGATGATCGG TACCGCGGGT
CTGCCCCACG TTATTATTCG CTTTTTTACC GTTCCTAAAG TAGCCGATGC GCGTTGGTCG
GCAGGCTGGG CACTGGTATT TATCGCCTTA TTATATTTTA CCGCCCCTGC TGTGGGTGCT
ATGGCACGTT TGAACCTGAT GGACACCGTC TATCCTCAAG GTGTTGATGC CCCTGCGCTA
CCTTATGATG AGCGTCCAAG CTGGATGCAG ACTTGGGAAG AGACCGGTCT TATCAAATAC
AATGACCTAA ATGGCGATGG CCGTATTCAG CTGTATAATG ACTCAGGTCT GGGCGCTGCT
AAGGCGGCAC TGGCCACAGC ACAAGCAGAA GGTGGCGATG TTGCTGCCGC CACTACCGCC
GTTGAAGAAG CCACTACCGC GCACGCTGGC GAGTTAGAGG GCAAGTTTGT CACTGCCGGC
TGGCAAGGTA ATGAGCTTGA TGTGAACAAT GATATTTTAG TACTGGCCAA CCCTGAGATT
GCCAATCTGC CACCTTGGGT TATTGGTCTA ATTGCAGCAG GTGGTTTGGC TGCAGCACTA
TCTACGGCCG CCGGTCTGTT ACTGGCCATC TCCTCTGCCA TTAGCCATGA CTTGGTAAAA
CGTAACTTCA ATCCTGACAT CACCGATAAA GGTGAGCTGT TGGTAGCCCG TATTTCAATG
GCGGTGGCCA TTGTGGTGGC AACTTACTTA GGTATTAACC CACCTGGCTT TGCCGCGCAA
GTGGTGGCAT TAGCCTTTGG TATCGCGGGT GCGTCTTTAT TCCCAGCACT GATGATGGGT
ATTTTCTCAA AGCGTATCAA CAACTACGGC GCTATTGCAG GGATGCTGGC AGGTCTAATC
ACTACCTTAG TTTATATCTT CGTGTACAAA GGTTGGTTCT TTATTCCACA TACCGCCAAT
CTTCCTGACA CTGCAGAATA CTGGCTGTTC GGTGTATCAC CCATGTCATT TGGTGCCATT
GGTGCGCTGA TCAACTTTGT TGTGGCTTTC TTAGTGTCAT CAATGACCCA AGCGCCTCCT
GTACACATTC AAAAATTGGT AGAAAGCGTA CGCTCTCCTC GTGGTGCTGG TGCTGCTATC
GATCATTAA
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| Protein sequence | MSQFTINLIF VGASFLLYFG IAIWARAGST KEFYVAGGGV HPVLNGMATG ADWMSAASFI
SMAGLLAAGG YGASSYLMGW TGGYVLLAML LAPYLRKFGK YTVPDFIGDR FYSKTAALVA
VACLIIASTT YVIGQMTGAG VAFSRFLEVD NTTGLIIAAV VVFFYAVLGG MKGITYTQVA
QYVVLIIAYT IPAVFISLEL TGNPIPGLGM FSNHTESGIP LLTKLDQVVT DLGFTAYTAD
VPSKLNMVLF TLSLMIGTAG LPHVIIRFFT VPKVADARWS AGWALVFIAL LYFTAPAVGA
MARLNLMDTV YPQGVDAPAL PYDERPSWMQ TWEETGLIKY NDLNGDGRIQ LYNDSGLGAA
KAALATAQAE GGDVAAATTA VEEATTAHAG ELEGKFVTAG WQGNELDVNN DILVLANPEI
ANLPPWVIGL IAAGGLAAAL STAAGLLLAI SSAISHDLVK RNFNPDITDK GELLVARISM
AVAIVVATYL GINPPGFAAQ VVALAFGIAG ASLFPALMMG IFSKRINNYG AIAGMLAGLI
TTLVYIFVYK GWFFIPHTAN LPDTAEYWLF GVSPMSFGAI GALINFVVAF LVSSMTQAPP
VHIQKLVESV RSPRGAGAAI DH
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