| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0255 |
|---|
| Symbol | |
|---|
| ID | 5204969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 299255 |
|---|
| End bp | 300424 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640598465 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001279160 |
|---|
| Protein GI | 148652067 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00641296 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00158849 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAG CCTCTGCCAA GATGCCTAAA TCTAAGCTTA AGCCTTTACT CTCAAAGACG
CTACTTACCA AGCCTTTGGG AGTGGCAAAT CAGCTGCTGC AGCCGTATCA CATTCAGCTG
CAGCACTGGG TCAGCTACGA TGGCAGCCAA ATCCCTGTGA CGGTCGTTGG CAGTCCATCC
GCCACACCTG TACTCTTGCT ACATGCGTTT GGCATGGATG CCCGTCAGTT TTTACCCTTT
GTGCTGCCGC TGGCTGGCCA ATACTGCTTT TATCTGCCTC ACTTTCGCGG CTTTGGGTTA
GCGGCTGGCA CGCCCAGCAG TGAGTTTAAC TTTATCGAGC AGTATGCCGA TGATGTGGAT
GTTATTCTGA CTCAGATTTG TAGTAAACAT CAGGTCAAGT CAGTGGATGT GGCCGCCATC
TCTATGGGTG CTTTGGTCAT GTGGGCGCAT TTTAATCGCC ATGCACAGCA TGCGCAGACA
GACAGCGCAC AGGCAGAAGA TAAACTAGCA GGTAAGCTAC AAGGCAAAGC AAAAAGCAAC
TTTGAAACCA AAACAGAAGC CACGTTTGAA ACTGCATCTA GAGTTAAGCG TTATTTGAAC
ATTGATCAAT CGCCTATCGT GCACAATCAC GCTGACTGGC AAGGCGGAGT GTTTGGGGAG
AAGCAGGCCG AAGTCTTTGA ACAATTTGAT ACGGTACTGC AAGCGACATT GCCTTATGTT
AATCAGCAAA GTGCTAATGG GCAAACACCC CTGGCATTTA CCCAATTGCC GCATCAGGTA
AAACGGCAAA TCACTCAGAT GGAAACTGCG TTTTCATTAT TGTCAGCCGG CCGCCTTGCG
TCGCAATTAT TTATTAAAGC CAGTGGTTAT CTGCCCGATC ATAAACTGGC AGTTTATCAG
CACCCCACTT GGCAACAAAA ACTGCGTGGT CTTCAGGCGT ATCTTGAGCT GCCGTATGAT
TACCGAGACG CTCTTCCGGT TACCCAGACT CCGGTGACCA TGCTGATTGG CGCTCAGTCC
CAGCTGTATG ATCCCAAATG GCAACGTCAG GTGGCCCATA TCTTGCCCAA TGCTCAGGTG
ATTGAGATTG CAGGCTCCGG TCATGCCATT CCGCTGGATG CACCGCTGCA GTTCTCACGT
GTGTTAAAGC AGTTTTTGGT TTCAGCTTAG
|
|---|
| Protein sequence | MTAASAKMPK SKLKPLLSKT LLTKPLGVAN QLLQPYHIQL QHWVSYDGSQ IPVTVVGSPS
ATPVLLLHAF GMDARQFLPF VLPLAGQYCF YLPHFRGFGL AAGTPSSEFN FIEQYADDVD
VILTQICSKH QVKSVDVAAI SMGALVMWAH FNRHAQHAQT DSAQAEDKLA GKLQGKAKSN
FETKTEATFE TASRVKRYLN IDQSPIVHNH ADWQGGVFGE KQAEVFEQFD TVLQATLPYV
NQQSANGQTP LAFTQLPHQV KRQITQMETA FSLLSAGRLA SQLFIKASGY LPDHKLAVYQ
HPTWQQKLRG LQAYLELPYD YRDALPVTQT PVTMLIGAQS QLYDPKWQRQ VAHILPNAQV
IEIAGSGHAI PLDAPLQFSR VLKQFLVSA
|
|---|
| |