| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0117 |
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| Symbol | |
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| ID | 5205506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 139848 |
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| End bp | 140954 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640598326 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001279027 |
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| Protein GI | 148651934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATTAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGTGTTAA GCTTTGAGCA TGTAAGACGC
ACAGGTAAGT ACTTTTCAGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGTGAGTAT
TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAA
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC
TTAGGTTGGA TACCTTTTAA GAAATCTGCC ATCAAGTATC TAAATACAAG ACAAACGGGG
AAGAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTC ATCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
GGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC ATCAACGGGT
GATAAACTAC AGATTAAGCA GACTCAAAAA TGGGCGAATA AATTAGCAGT CGCCCAGCGT
GCAAACAATA AAAGCCGGGC AAAGGCAATA CACGCCAAAA TTAAAAACTC AAGATTAGAT
GCCATACACA AATTCACCAC CCAATTAGTT AAGGATAATG CCTTAATTGT GGTTGGTGAT
ATTAAATCAC GCTCATTCAC CAATTCGATG ACCAACCTAG CTAAATCAAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTAA ATGAGAGTTA CACTACCCAA ACCTGTTCGT GCTGTCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTAGCTGTAG GAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NVLSFEHVRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLNTRQTG
KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRHRWYACI TVKDFPRQAS
GKGSVGIDLG LKQSATTSTG DKLQIKQTQK WANKLAVAQR ANNKSRAKAI HAKIKNSRLD
AIHKFTTQLV KDNALIVVGD IKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LAVGIPSV
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