| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4620 |
|---|
| Symbol | |
|---|
| ID | 5211606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5787193 |
|---|
| End bp | 5788443 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640598199 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001278901 |
|---|
| Protein GI | 148658696 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.405994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.099888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCTC GATCTCTTCG AATTATCGTC ATCACGTCGC CTGATCAACT CGATCAGGAA
TGGATCAACC GTCTTGCGCG CGAGGCGGAC GTCGAGGGCC TCGACCGTGT GGGCAGCGTG
GCTGCCGGAG TGCTTCTGGC GCAGCAGCAT CGCCCGGATC TGGTGATTGT GGATCGTGAT
GTCGAACAGA CAGAGTCTGC GATACGCCAG ATCTTCACGC AGGTTCCTTC CACCCTCTGC
ATTGCTGTCA CCCCTTCAGC GGATGTAACC TCACTGCGGC GCCTGGTGAT GGCTGGCGCC
CGCGATGTGA TCGGACGTCC GATCCAGCAT GCCGATCTGA TGAATAGCAT TCATGCGGTC
ATTGCCGCAG AACGTGATCG CGTCGCCCGC TCATCCGCGG GTGGCGACCG ACGCAACGGT
CGGTTGGTGG TTGTGATTGC GCCAAAGGGC GGGGTTGGCG CCACGACGAT CGCCGCCAAT
CTGGCGGTTG CGTTGCGTCA GGTGACGAAT ACGGGTGTAG CGCTTGCCGA TATGGGGTTA
CAATTCGGCG ATGTTGGCGT CCATTTGAAT ATCTGGTCGC GCCACACGCT CTACGATCTG
GTGATGCATG CCTATGAACT GGACGATGCG CTTTTTGAGA AAGTTTTGCA GGCGCATAGT
TCCGGGATCA AGGTGCTGCT TGCACCGCAC GATCTGGAAA TGGCTGGCGA CATCTCACGC
GAAGCGGTAG CGGCCGTGGT GCATGGGTTG CTGGAACGAC ACACGTATGT GGTATGCGAT
ACCTGGTCAT TCCTCGATGA AGTGACCGAG ACGCTGCTCG AGAAGGCGGA CGATGTGCTG
GTCGTAACGA CGCCGGAAGT GCCTGCGCTG CGCCATACCA AGAGTTTTCT GGAACATATC
TCACGCAATG AACTGACGCG CGGGCGGATC ACGCTGGTGC TCAACCGTTT CCCCAGCGTG
AACGGCATTG CGCTCCAGGA TATTCAGAAA CACCTGCGCT ATCCGGTAGG CGCCAATATT
CCGAGCGAAG GTCAACCGAT CACGCACAGC ATCAATCGCG GCGTGCCGGT TGTGATGGCG
CACCCTCAGA GTTGGGCAGG CCAGAGTTTC CTCAACCTGG CAGCATATGT CGCTGGCGAC
GGTGCACAAT TAATTTCGCT CAAACGTTCG GGCGGAAAGA AAGCCGGCAA AGGATCGCTG
CCGGGTGTGA AGGAGCGCCG CAGTCTGTTC AGCCTGGTGC GCGGTGCATA A
|
|---|
| Protein sequence | MTSRSLRIIV ITSPDQLDQE WINRLAREAD VEGLDRVGSV AAGVLLAQQH RPDLVIVDRD
VEQTESAIRQ IFTQVPSTLC IAVTPSADVT SLRRLVMAGA RDVIGRPIQH ADLMNSIHAV
IAAERDRVAR SSAGGDRRNG RLVVVIAPKG GVGATTIAAN LAVALRQVTN TGVALADMGL
QFGDVGVHLN IWSRHTLYDL VMHAYELDDA LFEKVLQAHS SGIKVLLAPH DLEMAGDISR
EAVAAVVHGL LERHTYVVCD TWSFLDEVTE TLLEKADDVL VVTTPEVPAL RHTKSFLEHI
SRNELTRGRI TLVLNRFPSV NGIALQDIQK HLRYPVGANI PSEGQPITHS INRGVPVVMA
HPQSWAGQSF LNLAAYVAGD GAQLISLKRS GGKKAGKGSL PGVKERRSLF SLVRGA
|
|---|
| |