| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4618 |
|---|
| Symbol | |
|---|
| ID | 5211604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5785576 |
|---|
| End bp | 5786364 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640598197 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001278899 |
|---|
| Protein GI | 148658694 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.182787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAG CGCTCGTGAT TCTCCACAAA GAATGGCTCG AACTGCGCGG TGAACGGACC
CTCCTGATGA CGGTCATCGT GCCGCCGCTG CTGCTGACCA TTCTGCCGAT CGTTGCGCTC
TACCTCATCG GTAGCACGCC CGACGAAGAT ACCAGCCAGC TTGGCGCTGT CATCGCCGAT
CCATCATTCG CCGGTCTGTC GGAACCGGAG GTGGGTCAGG CATTGATGGG CAAACAGTTC
GGGTTGATGT TTCTCATCAT GCCCCTCCTC GTCCCCGCCA CAATCGCGTC GTACAGCATC
GTTGGCGAGA AAATGCGCCG CACCCTCGAG CCGCTCCTTG CTGCGCCGGT GCGCACCTGG
GAACTGCTCC TGGGGAAATG CCTGGCGTCC CTTATTCCAT CGCTGATCAT CACCTGGGGC
GCCGCAGCGG TCTTTGTTCT GGCACTCCGG CTGATCGTCC TCAGTGATCG CGTCTATCAG
GTGATCCTGG GCGGCGGATG GTGGATCCTC CTGCTGCTCG GATCACCGTC GCTGGCGCTG
ATCATGGTGG CAGCCACGGT CGCTATTTCG GGTCGGGTCA ACGATCCGCG CACGGCACAG
CAGGTGTCGG CGGTGGTGGT TGTCCCGCTC CTGGCGCTGT TCATCGCTCA GTTGCTCGGC
GTCGTGGTGC TGACACCGCT GCTGGCGCTG ATTGCAAGCA CAGCGCTGGC ATTCCTGGCA
ATACTCGCCT TCGCCGGCGC AATTCTCCTC TTCGAACGTG AAAATATCTT AACCCGCTGG
GCGTCCTGA
|
|---|
| Protein sequence | MRKALVILHK EWLELRGERT LLMTVIVPPL LLTILPIVAL YLIGSTPDED TSQLGAVIAD
PSFAGLSEPE VGQALMGKQF GLMFLIMPLL VPATIASYSI VGEKMRRTLE PLLAAPVRTW
ELLLGKCLAS LIPSLIITWG AAAVFVLALR LIVLSDRVYQ VILGGGWWIL LLLGSPSLAL
IMVAATVAIS GRVNDPRTAQ QVSAVVVVPL LALFIAQLLG VVVLTPLLAL IASTALAFLA
ILAFAGAILL FERENILTRW AS
|
|---|
| |