Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4606 |
Symbol | |
ID | 5211592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5772493 |
End bp | 5773296 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640598185 |
Product | glycosyl transferase family protein |
Protein accession | YP_001278887 |
Protein GI | 148658682 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.532863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC CACGCGCCGA ACCCCTTGCC ACGCTGTCGG TGGCGATCAT TGCCCGGAAT GAAGAGCGGC ACATCGGCGG CGCGCTTGCC AGCGTCGTGG ATCTTGCTGG CGAGATCGTT GCTGTGGTCG ACAATCGTTC CTCCGATACG ACTGCCGATA TCTGTCGCAC GTTCGGCGCG CGGGTACATA TCGAGCCGTG GCGTGGCTTT CCGGCGCAGC GCAATCGCGC ACTCGATCTC TGTACCGGTA CATGGGTATT GTTCCTCGAT GCCGATGAAC GGGCGCCCCC CGACCTGGCG GCAGAGATTC GCGCTGCGCT GACCGGCGAG TCGGGTATGG CGGGGTTCTG GATCCCGCGC TACAACCTGT TCTTTGGGCA ACGGCTGCGC GGCGGCGGGT GGTACCCTGA CCATCAACTG CGGTTGATGC GCCGGGCATG CGCCCGCTAC GACGAGTCGC GCCTGGTGCA CGAAGTCGCT GCACTCGATG GACCTGCTGG CACGCTGCGC CATCATCTGC TGCATCTCAA TATCGAGCAT CTCGACGAGT TGTGGCGCAA GCAGCGGGCG TATGCCATCC AGGAGGCGCA TACGCTCTTC CTGGCGGGCG CGTCGGTGCG CTGGCGGACG TTCATCGGCG CGCCAGCGCG CGAGTTCTAC CGGCGTTTCG TCACCCTGCA TGGCTACCGC GATGGAGCGC TCGGTCTGTT TCTCTGCGCA ACGATGGCGT ACTTCGAAGT GGTGAAATAC GTTCATCTCA AGGGGCTGAC CACGTTCAAA CATTCGTTGC AACTTCAGCG TTAA
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Protein sequence | MTPPRAEPLA TLSVAIIARN EERHIGGALA SVVDLAGEIV AVVDNRSSDT TADICRTFGA RVHIEPWRGF PAQRNRALDL CTGTWVLFLD ADERAPPDLA AEIRAALTGE SGMAGFWIPR YNLFFGQRLR GGGWYPDHQL RLMRRACARY DESRLVHEVA ALDGPAGTLR HHLLHLNIEH LDELWRKQRA YAIQEAHTLF LAGASVRWRT FIGAPAREFY RRFVTLHGYR DGALGLFLCA TMAYFEVVKY VHLKGLTTFK HSLQLQR
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