Gene RoseRS_4606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4606 
Symbol 
ID5211592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5772493 
End bp5773296 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID640598185 
Productglycosyl transferase family protein 
Protein accessionYP_001278887 
Protein GI148658682 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.532863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC CACGCGCCGA ACCCCTTGCC ACGCTGTCGG TGGCGATCAT TGCCCGGAAT 
GAAGAGCGGC ACATCGGCGG CGCGCTTGCC AGCGTCGTGG ATCTTGCTGG CGAGATCGTT
GCTGTGGTCG ACAATCGTTC CTCCGATACG ACTGCCGATA TCTGTCGCAC GTTCGGCGCG
CGGGTACATA TCGAGCCGTG GCGTGGCTTT CCGGCGCAGC GCAATCGCGC ACTCGATCTC
TGTACCGGTA CATGGGTATT GTTCCTCGAT GCCGATGAAC GGGCGCCCCC CGACCTGGCG
GCAGAGATTC GCGCTGCGCT GACCGGCGAG TCGGGTATGG CGGGGTTCTG GATCCCGCGC
TACAACCTGT TCTTTGGGCA ACGGCTGCGC GGCGGCGGGT GGTACCCTGA CCATCAACTG
CGGTTGATGC GCCGGGCATG CGCCCGCTAC GACGAGTCGC GCCTGGTGCA CGAAGTCGCT
GCACTCGATG GACCTGCTGG CACGCTGCGC CATCATCTGC TGCATCTCAA TATCGAGCAT
CTCGACGAGT TGTGGCGCAA GCAGCGGGCG TATGCCATCC AGGAGGCGCA TACGCTCTTC
CTGGCGGGCG CGTCGGTGCG CTGGCGGACG TTCATCGGCG CGCCAGCGCG CGAGTTCTAC
CGGCGTTTCG TCACCCTGCA TGGCTACCGC GATGGAGCGC TCGGTCTGTT TCTCTGCGCA
ACGATGGCGT ACTTCGAAGT GGTGAAATAC GTTCATCTCA AGGGGCTGAC CACGTTCAAA
CATTCGTTGC AACTTCAGCG TTAA
 
Protein sequence
MTPPRAEPLA TLSVAIIARN EERHIGGALA SVVDLAGEIV AVVDNRSSDT TADICRTFGA 
RVHIEPWRGF PAQRNRALDL CTGTWVLFLD ADERAPPDLA AEIRAALTGE SGMAGFWIPR
YNLFFGQRLR GGGWYPDHQL RLMRRACARY DESRLVHEVA ALDGPAGTLR HHLLHLNIEH
LDELWRKQRA YAIQEAHTLF LAGASVRWRT FIGAPAREFY RRFVTLHGYR DGALGLFLCA
TMAYFEVVKY VHLKGLTTFK HSLQLQR