Gene RoseRS_4585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4585 
Symbol 
ID5211571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5744467 
End bp5744799 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID640598164 
Productsmall multidrug resistance protein 
Protein accessionYP_001278866 
Protein GI148658661 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.631388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCTC GCGGGCTGGC GCTCCTCTTC GGCGCAATCG TATGCGAACT TATTGGAACG 
AGCGCCCTTA AAGCAACCGA CGGCTTCACA CGTCTGCTGC CAACCCTCCT GGTCATTGCC
GGGTACGGAG CATCATTCTA CCTCATGTCG CTCAGTCTGC GCACCATTCC GCTCGGCATC
GCCTATGCCA TCTGGTCGGG TCTGGGCACG GCGGCTATCG CGGTCATCGG GGTGATCGTG
TGGCGCGAGC AGTTGAATAC GGCGGGAGTC ATCGGCATTG TGCTGATCAT TATCGGTGTG
ATACTGCTGA ATATGTTCGG CGGTGAACAG TAA
 
Protein sequence
MDPRGLALLF GAIVCELIGT SALKATDGFT RLLPTLLVIA GYGASFYLMS LSLRTIPLGI 
AYAIWSGLGT AAIAVIGVIV WREQLNTAGV IGIVLIIIGV ILLNMFGGEQ