Gene RoseRS_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4563 
Symbol 
ID5211548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5720870 
End bp5721370 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID640598141 
ProductNUDIX hydrolase 
Protein accessionYP_001278844 
Protein GI148658639 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CATATGTTCA AACCTGTCAA ACGCGCCCGT TCGCTGTGGC GACGCAGTTT 
GCCGCGTGCG GCGTCGTGTA TCGCTGGACA ACCAATGCGT TCGTTGAGTT CTTACTGATC
AAGAAACGCG GTGACTGGAC CCTGCCGAAG GGACAACTCC TGGAAGGCGA ACCGGCCGAC
GTAGCGGCGC TGCGCGAGGT GGCCGAAGAG ACGGGATTGC GCGGCGTTTT GCACGGCGAA
CTGCTGCGGA CGCTCTATCC CGTTGTCAAG GGCGGGCAGG TCATCCACAA GCAACTCATA
TACTTTCTGG TCCGCGTCGT AGATGGAACG GAGCGCCCTC AATTCAACGA GCGTATCACG
ATGCTGCGCT GGTGCACGCT GATCGCCGCA CTCCGCCTGC TCCGTCAGTC CCACCATCGG
GTGGCGGTGC TCGCCGCAGC GGAGCGTCTG GCAAGCGATG CGATGGAAGC TGGACATCCG
GGCAACCTCT ATCGACCCTG A
 
Protein sequence
MTTSYVQTCQ TRPFAVATQF AACGVVYRWT TNAFVEFLLI KKRGDWTLPK GQLLEGEPAD 
VAALREVAEE TGLRGVLHGE LLRTLYPVVK GGQVIHKQLI YFLVRVVDGT ERPQFNERIT
MLRWCTLIAA LRLLRQSHHR VAVLAAAERL ASDAMEAGHP GNLYRP