Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4563 |
Symbol | |
ID | 5211548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5720870 |
End bp | 5721370 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640598141 |
Product | NUDIX hydrolase |
Protein accession | YP_001278844 |
Protein GI | 148658639 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCT CATATGTTCA AACCTGTCAA ACGCGCCCGT TCGCTGTGGC GACGCAGTTT GCCGCGTGCG GCGTCGTGTA TCGCTGGACA ACCAATGCGT TCGTTGAGTT CTTACTGATC AAGAAACGCG GTGACTGGAC CCTGCCGAAG GGACAACTCC TGGAAGGCGA ACCGGCCGAC GTAGCGGCGC TGCGCGAGGT GGCCGAAGAG ACGGGATTGC GCGGCGTTTT GCACGGCGAA CTGCTGCGGA CGCTCTATCC CGTTGTCAAG GGCGGGCAGG TCATCCACAA GCAACTCATA TACTTTCTGG TCCGCGTCGT AGATGGAACG GAGCGCCCTC AATTCAACGA GCGTATCACG ATGCTGCGCT GGTGCACGCT GATCGCCGCA CTCCGCCTGC TCCGTCAGTC CCACCATCGG GTGGCGGTGC TCGCCGCAGC GGAGCGTCTG GCAAGCGATG CGATGGAAGC TGGACATCCG GGCAACCTCT ATCGACCCTG A
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Protein sequence | MTTSYVQTCQ TRPFAVATQF AACGVVYRWT TNAFVEFLLI KKRGDWTLPK GQLLEGEPAD VAALREVAEE TGLRGVLHGE LLRTLYPVVK GGQVIHKQLI YFLVRVVDGT ERPQFNERIT MLRWCTLIAA LRLLRQSHHR VAVLAAAERL ASDAMEAGHP GNLYRP
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