| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4515 |
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| Symbol | |
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| ID | 5211500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5660060 |
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| End bp | 5662240 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640598093 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001278796 |
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| Protein GI | 148658591 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG ACCACCTCAC ACGCCGCGTT GAAGCGCTGC GTGAACAGAT CCGCTACCAC
AACTACCGCT ATTACGTCCT CGACGAACCG GTCATCAGCG ACGCCGAGTA CGATGCGCTG
ATGCGCGAAC TGCGCGCGCT CGAAGCGGCA CACCCCGAAC TTGTCACCCC CGACTCGCCG
ACGCAGCGGG TTGGCGCGCC GCCGGGTGAG CAGTTCGCTA AAGTGCAGCA CGTCGTGCCG
ATGCTGTCGC TCGCCAATGC GTCCGACGAG GCTGAGGTGC GCGCCTGGTA CGACCGGGTG
GTGCGTTTGC TTGGCAACGA TGCGCGGGTT GCATTCGTCG TCGAGCCGAA GATCGATGGG
CTGGCGGTGA CCCTGATCTA TCGCAACGGC ATCCTGGTGC GCGGCGCGAC CCGCGGCGAC
GGTGAGACCG GCGAGGATGT GACCGCTAAC CTGCGCACTA TTCCCGGCAT TCCATTGCGC
CTGGGCGCAT TTGCCAGCAA CCCCGAAGGG CAAACGAATG GCGCACCGGT TCAGGCGGTC
ATTCCGCCGT TGATCGAAGT GCGCGGCGAA GTGTATATGC GCATCGCCGA CTTTCTACGC
CTGAATGAAC AACTGGCGGC ATCCGGCGAG AAAGTCGCCG CCAATCCGCG CAATGCGGCT
GCCGGTTCGT TGCGCCAGAA AGACCCGGCG ATCACTGCGC GGCGTCCGTT GCGCTTCTTT
GCCTACGGCA TCGGGCAGAT CGAGGGAGTG CAGGTGCAGA CGCAGTGGGA AACGCTCAAC
CTCCTCCGCA CGCTCGGTTT TCCGGTCAAC CGCGATGCGC GCCGCTTCGA GCGCCTGGAT
GATGCGCTGG CGTACTGCCG CGAGTGGATG ACGCGCCGCG ACGAACTGGA GTACGAGGTT
GACGGCGTGG TGATCAAGAT CGACAGTCTT GCGCAACAGG CGCAGTTGGG CGTCGTCGGG
CGCGATCCGC GCTGGGCGAT TGCGTTCAAG TTCCCGGCGC GGGAAGCGGT CTCACGCCTG
ATCGATATTG TGGTGAATGT CGGGCGCACC GGCGTGATTA CCCCCAATGC GGTGATCGAG
CCGGTCAACA TCGGCGGTGT GACAGTGCGG AATGCCAGTC TGCACAATGC CGATTACATC
GCCGAACGCG ACATTCGGAT CGGCGATTAT GTCATCGTCA AGCGCGCTGG CGACGTGATC
CCGTACATTG TCGGACCGAT CGTGGCGCGG CGTGATGGCA GCGAACGTCC GTGGCAGATG
CCAGCGACAT GCCCGGCGTG CGGCACGCCG CTCGAACGCG CCGAGGGCGA GGTGGCGTAT
CGCTGCCCGA ACTTTGGCAT CTGCCCGGCG CAGATTACCC GCCGGATCGA ACATTTCGTA
TCACGCGGCG CGATGGATAT CGCGGGGATC GGCGAGAAAC AGGTGCAACT CTTCGTCGAA
CGCGGCTGGG TGCAGGATGT CGCCGACCTG TACACGTTGA CGCCGGATCA TTTTGCAAAC
GTTGAAGGGT ATGGTCCCAA ACGGGTCGCC AATCTGCTCA GCGCCATCGC CGGGTCGAAG
AATCGCCCGC TCCACCGCCT GATCGTCGGG CTTGGCATTC GCTATGTCGG CGAAGTCGTC
GCCCAGATCC TCGCCGACCA TTTTGGTTCG CTCGATGCGC TGGCAGCCGC TTCTGCCGAT
GAAATCGATG CCCTGGAGGG CATCGGACCG GCTATCGCCG CAAGTGTTGC GGCATACTTC
GCCAGACCCG AAAGCAAAGC GCTGATCGCT AAGTTGAAGC GGGCCGGTGT GCGCACCGAA
GCGCAGGAAA CGGCGCGCGC GTCGCGCGGG AATGCGCTGG CGGGCAAAAC GTTCGTGATC
ACCGGCACGT TGCCATCGAT GTCACGCGAA GAAGCCAGCG CCCTGATTAC TGCCCATGGC
GGCAAGGTCA GCGGCAGCGT CTCCAAAAAA ACCGATTATC TGGTCATCGG CGCAGAACCG
GGCGGAACAA AGTTCGCAAA AGCGCAGGAA CTTGGCATTC CCATGATCGA CGAAGCCGGA
CTGCTGGCGC TGATCGGATC GGGCAGAACC GCAGACGACC AGGCGACGCC TGCATCGGAC
AGGCGCGCTG CGACAGCGAG CGTTCCGCCA TCAGACGATG CGCCAGGGTC GCCCCGGCAG
TTAGATTTTG ATCTTACATA A
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| Protein sequence | MNNDHLTRRV EALREQIRYH NYRYYVLDEP VISDAEYDAL MRELRALEAA HPELVTPDSP
TQRVGAPPGE QFAKVQHVVP MLSLANASDE AEVRAWYDRV VRLLGNDARV AFVVEPKIDG
LAVTLIYRNG ILVRGATRGD GETGEDVTAN LRTIPGIPLR LGAFASNPEG QTNGAPVQAV
IPPLIEVRGE VYMRIADFLR LNEQLAASGE KVAANPRNAA AGSLRQKDPA ITARRPLRFF
AYGIGQIEGV QVQTQWETLN LLRTLGFPVN RDARRFERLD DALAYCREWM TRRDELEYEV
DGVVIKIDSL AQQAQLGVVG RDPRWAIAFK FPAREAVSRL IDIVVNVGRT GVITPNAVIE
PVNIGGVTVR NASLHNADYI AERDIRIGDY VIVKRAGDVI PYIVGPIVAR RDGSERPWQM
PATCPACGTP LERAEGEVAY RCPNFGICPA QITRRIEHFV SRGAMDIAGI GEKQVQLFVE
RGWVQDVADL YTLTPDHFAN VEGYGPKRVA NLLSAIAGSK NRPLHRLIVG LGIRYVGEVV
AQILADHFGS LDALAAASAD EIDALEGIGP AIAASVAAYF ARPESKALIA KLKRAGVRTE
AQETARASRG NALAGKTFVI TGTLPSMSRE EASALITAHG GKVSGSVSKK TDYLVIGAEP
GGTKFAKAQE LGIPMIDEAG LLALIGSGRT ADDQATPASD RRAATASVPP SDDAPGSPRQ
LDFDLT
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