Gene RoseRS_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4458 
Symbol 
ID5211443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5593258 
End bp5594001 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID640598037 
Producthypothetical protein 
Protein accessionYP_001278740 
Protein GI148658535 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.169961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC AGCCGCGCCG ACGTGCCGCG TTATTCGTTA CCTGCATCGT CGATCAGATC 
TATCCCGACA TTGGGTTCGC CGCTGCCGAA CTGCTCGAAC GCCAGGGGGT CGAGGTGCAC
GTCCCTCGTG GACTGACGTG TTGCGGGCAG ATGGCGTTCA ATGCCGGGTT CCGCGACGAT
GCCTATGCCG TTGCGGGACG AACCATCGAG ATCCTGCGCA ATCAGGGGGA TGTGGTGCTC
CCTTCCGGAT CATGCGGATC GATGATTCGC CATCTGTACC ACGAACTGTT TCATGGCACT
CGCCACGCAG CGGCAGCAAA AGAACTGGCG AGCCGCACCT ATGAGTTGAG CGAGTATCTG
GTCGATGTTC TCGGCGTTAC CGATGTCGGC GCGCGATACG ATGGCGTCAT CGCGTTTCAC
GATGCATGCC ACGGGATGCG CTACATGGGG CTGGGACGAC AGGCGCGCAC GTTGCTTGAT
CATGTCGCTG GCGCGCGGAT CGTCGCCCTG CCGGGAAGCG ACGAATGCTG CGGCTTCGGC
GGTCTGTTCG CAGTCAAGCA ACATCAGATC TCCGAAGCGA TGCTGCACCG TAAATTGACG
CACATCACGG AATGTGGGTG CGATCTGGTC GTCACCGGCG ACGCAAGTTG TATGACACAG
ATCGCTGGCG GTCTCAGTCG GTCGAAATCA CGGGTGCGAG CGTGTCACCT CGCCGAAGTG
CTGGCAAATC GGGTAAGGGT TTAG
 
Protein sequence
MTAQPRRRAA LFVTCIVDQI YPDIGFAAAE LLERQGVEVH VPRGLTCCGQ MAFNAGFRDD 
AYAVAGRTIE ILRNQGDVVL PSGSCGSMIR HLYHELFHGT RHAAAAKELA SRTYELSEYL
VDVLGVTDVG ARYDGVIAFH DACHGMRYMG LGRQARTLLD HVAGARIVAL PGSDECCGFG
GLFAVKQHQI SEAMLHRKLT HITECGCDLV VTGDASCMTQ IAGGLSRSKS RVRACHLAEV
LANRVRV