| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4434 |
|---|
| Symbol | |
|---|
| ID | 5211419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5556818 |
|---|
| End bp | 5558176 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640598013 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278716 |
|---|
| Protein GI | 148658511 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.82204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGCA TATGTGATTG TCGCTCGCCG CACGACGTAG CAGGAAGAGC AAAGGCAGTG
CGCATTCTGT TTCTTTCCTA TTTCTTTCCG CCGTACAACA TCATTGCTTC AGTTCGCGCC
GGAAAGACGG CAACATACCT GCATCGGTTC GGGCACGACG TTCGGGTCGT AACGGCTCGA
CCGCTCCCAT ATCCGGTCGA TCTGCCCGTT GAATTTCCGC AGGAGCGCAT CTCTGCCACG
CGCTGGCTTG ATATCAGCTG GCCCCACACG CTTGCCACCC GTTGTCGTGG TCGAGGCGCC
AGCGTTGCCG GTCTCGTTGG CGGCGCGCAA CCACTGCGAT CCCCGTACCA TCTGGCAATC
CGGCTGCTGG ACATCTATCG TATCCTGCTG GCGTTTCCTG ATGATGCGAT TGGCTGGTTT
CCATTTGGAT GGGCACAAGG AGAGCGTTTA TTGAAAGAGT GGCGCCCAGA TGTAATCGTT
GCCAGCAGCG GACCTCCAAC ATCGCTGCTG ATTGCCGCTG CACTGCGGCA GCGGCATGGT
GTGCCCTGGG TCGGTGAGTT GCGCGATCTC TGGACGGATA ATCACTACTA TACCTTTCCC
ACGTGGCGGC GGGTGCTGGA AACGTGGATC GAGCGCCGGA CACTGCGCAC TGCTGCGGGT
CTGGTCACTG TCTCTGAGCC GCTGGCGCAA ATGCTGCGCC TGCGCTACGA TATGCCGGTA
TGTGTGGTGC TGAACGGTTT CGATCCAGCC GACTACCCGC CTGTACAACG GTTGCAGCCG
GATCGATTCC TGCGCATTGT GTACACCGGC AATGTGTATG CAGGCAAACG GAGCGCCGCG
CCGCTCTTCG CCGCATTGCA GCGCCTTGGA TCACGCGCCG GGCAGGTGCG GGTCACGTTC
TACGGCTGGG GTGTTCAGGG GATGGTGTCC ATCATGTCAG AGGCGCAGCA TTACGGTGTA
GCCCATGTGC TGGAGGTGAA AGATGCGGTG CCATATCGGG AAGCGCTGGG TCTCCAGCGC
GCCGCCGATG TGGTGCTGTT GCTCCTCTGG AACGATCCGC GTGAACGCGG GGTGTACACC
GGCAAACTCT TCGAGTACCT GGGGGCGCGC CGCCCGATTC TGGGGATCGG TCCCGCCGAT
AACGTTGCGG CTGACCTGAT CCGTGAGCGC CAGGCGGGGA TGGTCTCCGC CGATCCTGAT
GAGATTGCCG GGCAACTTAT CCGCTGGCTG GATGCAAAGG AGTGTGGTGG TATTCCCGAC
CTGCCAGCGT CGGTTGCGGC AGGATTGTCG CGTGAGGAAC AGACTCGTCG CCTGGAGTGG
TTTCTGATAC AGATTGTCGG CAAACCATCG CCGGGTTGA
|
|---|
| Protein sequence | MRRICDCRSP HDVAGRAKAV RILFLSYFFP PYNIIASVRA GKTATYLHRF GHDVRVVTAR
PLPYPVDLPV EFPQERISAT RWLDISWPHT LATRCRGRGA SVAGLVGGAQ PLRSPYHLAI
RLLDIYRILL AFPDDAIGWF PFGWAQGERL LKEWRPDVIV ASSGPPTSLL IAAALRQRHG
VPWVGELRDL WTDNHYYTFP TWRRVLETWI ERRTLRTAAG LVTVSEPLAQ MLRLRYDMPV
CVVLNGFDPA DYPPVQRLQP DRFLRIVYTG NVYAGKRSAA PLFAALQRLG SRAGQVRVTF
YGWGVQGMVS IMSEAQHYGV AHVLEVKDAV PYREALGLQR AADVVLLLLW NDPRERGVYT
GKLFEYLGAR RPILGIGPAD NVAADLIRER QAGMVSADPD EIAGQLIRWL DAKECGGIPD
LPASVAAGLS REEQTRRLEW FLIQIVGKPS PG
|
|---|
| |