Gene RoseRS_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4432 
Symbol 
ID5211417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5553888 
End bp5555177 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content63% 
IMG OID640598011 
Producthypothetical protein 
Protein accessionYP_001278714 
Protein GI148658509 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.361028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGTTGATTTC ATACTACTTT CCGCCCCACA ACATTGTCGC CGCCGTTCGC 
ACGGGAAAAA CGGCGAAGTA TCTCTGGCAG CACGGGCACG AGGTGCGCGT GCTGACCGCG
CAGCGTCTGC CGTTCGCTGC GAACCTGCCG CTGGAAATCC CGCCCGACGC CGTTATCCGC
ACTCGACGGA TTGATACCTG CTGGCTTTCC TCGCAGGTGC AGCGCATGCG TCAGCAAGCG
GCATTCGTGC AGACGGTGGC GCAACAAGCG CAAACGCGCC AGATGCGCTG GCTGCGCCAG
ATGATGATCG CCTATCGCAC ACTCTGCGCC TTTCCCGATG AAGCCATCGG ATGGTACCCC
TTTGCTCTGG CAGCAGCGCG GCGGTTGTGG CAACGCTGGC AACCGGACGT TCTGCTGGCA
AGCAGCGCTC CGCCAACGAC CCTCCTGCTG GCGCATGCCC TTCATCGGCA GTATGGCGTC
CCGTGGGTTG GTGAACTGCG CGATCTGTGG ACCGACAATC ATTACTACCC CTTTCCCCTC
TGGCGAAAGG CGCTCGATGC CTGGCTGGAA CGCCGGATTC TTCAGAGCGC CGCCGGGTTG
GTGACCGTTT CGGCGCCGCT GGCGCAGACG CTCGAATGGC GATCCGGAAA GCCGGTCGGT
GTGGTGCTCA ACGGCTTCGA TCCGGGGGAT TATCCGCCGC AACGGTTGCC TGCCAGCGGC
GGGATACTGC ACATCGTGTA CACCGGCGTG GTCTATCCTG ATCACCAGAG CGCGGCGCCT
CTCTTTGCAG CGCTGCGCCA TCTCGGTGAA CGTGCAGAGC GAGTGCGGGT CAGTTTCTAT
GGGAATGGCG CCGGGTACGC GCTCGCGGAG GCGCAGGATC AGGGAGTGGA GCAGATGGTC
GTCTGTCATG GTCCGGTTCC CTACGCCGAC GCCCTTGCAC AGCAGCGCGC CGCCGACGTC
TTACTGCTGC TCCTGTGGAA CGATCCGCGT GAACGCGGGG TGTACACCGG CAAACTGTTC
GAATATCTGG GCGCACGCCG CCCAATCCTG GCGATCGGAC CGGCGGACAA TGTGGCGGCA
GCACTGATCC GCGAACGACA GGCAGGGATA GTATTATCCG ATCCAGCGGA GATCGCCAAT
CACCTGGCGC GCTGGCTGGA AGCAAAGGAA CGCGGCGCCG ACATTCCCGA CCTGCCAGCG
TCGGTTGCGG CAGGATTATC GCGCGAGGAA CAGACTCGTC GCCTGGAGCG GTTTCTGGAG
CGCTTCGTCG GCGTTGCTTC GATAGAGTAG
 
Protein sequence
MRILLISYYF PPHNIVAAVR TGKTAKYLWQ HGHEVRVLTA QRLPFAANLP LEIPPDAVIR 
TRRIDTCWLS SQVQRMRQQA AFVQTVAQQA QTRQMRWLRQ MMIAYRTLCA FPDEAIGWYP
FALAAARRLW QRWQPDVLLA SSAPPTTLLL AHALHRQYGV PWVGELRDLW TDNHYYPFPL
WRKALDAWLE RRILQSAAGL VTVSAPLAQT LEWRSGKPVG VVLNGFDPGD YPPQRLPASG
GILHIVYTGV VYPDHQSAAP LFAALRHLGE RAERVRVSFY GNGAGYALAE AQDQGVEQMV
VCHGPVPYAD ALAQQRAADV LLLLLWNDPR ERGVYTGKLF EYLGARRPIL AIGPADNVAA
ALIRERQAGI VLSDPAEIAN HLARWLEAKE RGADIPDLPA SVAAGLSREE QTRRLERFLE
RFVGVASIE