| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4426 |
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| Symbol | |
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| ID | 5211411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5546174 |
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| End bp | 5547457 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640598005 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001278708 |
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| Protein GI | 148658503 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0253481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.320034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG TTAAGAAAAT TTCTTCTTCC CTGTACTCAT CAGTTTTTGG TGAAAATTTG
CGTTTTCGGA GAAATACCGT TCTAGCAGTA AAGGCAAATG TTCTCGCTCA GGTAATATCA
TTCGCTTTTG CGCCAATAAT AACCAGAATG TACAGCCCCG CAGATTTTGG GGTACTAGCG
GTAATAAACT CAATACTTTC TTTCTTTCTC TCTTTCTCTT CATTGAAATT AGATTGGTCT
ATCCCAAATA CAAGATCTCG CTGTCAGGCG TTTATTCTTT TGTTCGTTGG TCTGTTGACC
CTTTCTTTGG TTAGTTCATC GCTATTTGTT TTTGTTTGGT TCTGTGATGG TAGATGTACA
CCCTATTTTC AGAACATAAA CCCTTTTCTT TGGTTTCTGC CTGTTCTTTT GTTGACCAGC
GGTTTTCAGC AATTGTTGCA GGCATGGTAC GTGCGAGAGG CAAACTTTGA ACACACTAGC
AAGGTTAGAG TATATCAAAG CATTACAGGG ACGATTTCTT TGCTCTTTGG GGGTTTTGCG
AAAATGGGGG TTACTGCCTT GATCGGTAGT ACTCTTTTGT CTAGTTTGGT AGGTCTAAGT
ATTCTCACTT ACCATGCCAG ATTAAAGAAC CTTCTTAGAA GACTATCTTT TGCGCGCTTA
AGGTCTAGTT TGAGAAGCTT TTGGCGAGAT TCGGTTGCTT CCACTTTTGT TGCCATCGTT
AATACCGCTA GTCTTACGAT TGTTCCTTTT TTACTCTCGG TATACTATAG TGCAACAGAA
GTCGGTTGGT ATGCTTTTAT GTATCGTGTT GTTCTAACTC CAGTTGATGT CATTACTTCT
GCTATTTCAC AAAGTTTTTG GGCAGAAGCT GCCAATCTAA TAAAATATGA TCGATCAGGT
CTTAGAAAGC TGTATATGAG AACTATCCGG CACTTGTTAG CCATAGCTGT GCTGGTTGCC
CTAATTGCTT TACTAGGCCC CTTTTACGTG GGCTTTGTGT TCGGGGAAGA TTGGTATAGA
GCAGGTTATG TTCTTGCCGC ATTAGCGCCA CTTCTCCTTG GACATATTGC AATACCGACT
CTTTCTCATC TGGTGGTTCA TCGGAAACAA CATTGGCAGT TAATCTGGGA CATTCTCCGC
TGTGCGTTTT TGGTAGTGGC AATAGTGGTT TGTAGTGAAA TGAATATGAG CATCGAGATT
ACGGTTCTTG CGAGTTCGTT CGTTATGTTA GTTATGTATC TCGTTCTGTT TTGGCTTAAT
CTCGTTAACT TGGAGGTAAA GTGA
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| Protein sequence | MKAVKKISSS LYSSVFGENL RFRRNTVLAV KANVLAQVIS FAFAPIITRM YSPADFGVLA
VINSILSFFL SFSSLKLDWS IPNTRSRCQA FILLFVGLLT LSLVSSSLFV FVWFCDGRCT
PYFQNINPFL WFLPVLLLTS GFQQLLQAWY VREANFEHTS KVRVYQSITG TISLLFGGFA
KMGVTALIGS TLLSSLVGLS ILTYHARLKN LLRRLSFARL RSSLRSFWRD SVASTFVAIV
NTASLTIVPF LLSVYYSATE VGWYAFMYRV VLTPVDVITS AISQSFWAEA ANLIKYDRSG
LRKLYMRTIR HLLAIAVLVA LIALLGPFYV GFVFGEDWYR AGYVLAALAP LLLGHIAIPT
LSHLVVHRKQ HWQLIWDILR CAFLVVAIVV CSEMNMSIEI TVLASSFVML VMYLVLFWLN
LVNLEVK
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