| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4411 |
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| Symbol | |
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| ID | 5211396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5529611 |
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| End bp | 5531602 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640597991 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001278694 |
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| Protein GI | 148658489 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3463] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0414403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.531187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAT CACCTCTTAG TCGTAATGTT ATTCATGACC CTGTGCTCTG GGTAGCAGTG
ATCATCTATC TAGTGATGAT CGGTTGGTTG AGTATAGCCC GTTACATGGG TTTCAACGCA
GGTGTTCTTG ATTTAGGGAC TATGTATCAG GCGATTGCTT CAACACTTAG AGGTGAACCG
CTCATAGTAA CATCTCCTCA AGGAAACGTC TCGCGACTTG CAGGGCACTT TGAACTTATC
TATTATGCGT TTGCCCCATT GATTGCTCTA TGGCCTGATC CACGAGTACT GTTGATTGGA
CAGACATTAT TGGCGGCAAG TGGCGCTTTT CCAGCGTATG CGATTGCGCT ACGTCGACTG
GATAGTGTGC TGGCTGCACG TAGTATTGTG CTGATCTACC TGCTCTACCC GGTTGCCCTT
ACCGCCGTCC TCTTCGACTT CCATGGCGAT ACACTGGCCA TGCCTATGAT TCTCTGGTTA
GTCGATGCTC TTGAGCGACG TAGTAGGTGG TCAGCGGTTG TCTGGGCGGG TTTGTGCCTC
CTGTGTAAAG TGTATGTTGC TGTCGCTGTG GCAGCAATAG GCGCTTATTT CTTTCTGTGG
GGCGGACAAC GCCGTGTCGG TCTGGTGACA AGTGTATCTG CAGTAGCCTA TGGTGCGTTG
GTTTTTTTTG TCCTGCGCCC CCTCTTTGAA GATGCTGGTG GAAGTCGCAT TCACAACAAT
TATGTAGAGC AGTACTTCGG GGCGTTTGAT ACATTGCTGA GTACTGTCGG TGAGCGATTG
CTCAATGCTC TGGTAGTCGT TGGTCCGGTG TTGCTTTTGG CATGGCGCGG GTGGCGATGG
CTTTTTGTAT CTACTCCTAT TCTGTTTGCT GTGCTCATCA GTACTGGTCC TGGTACGACC
TACCATTATG CTTACCATCA CTATGCGCTG GTGGTGCCAT TTATAGTTTT ATCTGTTATT
GAAGGTGCTG AAAAGCTTTG CCATCTGGTA AAGGTAGATC AAAAGAACGG TATAATCTCT
GCTTCGGGAA ACATGGTGAA ATCCTCGGTC AAAACCCTTA ATTCCTTCCA AAGGAGCTGG
CGTTCCGACC TGGTATTCTG TACCGTAACT ACTGTTCTCA CAAGCGCAGC TCTGGTCGAT
ATACCGCTAA ACCCAACTTT TTGGGTCGGT TTACCAGGTT TAGGAGTCGA TCAGGCTTCT
TATGGCATAA CATCGCGTGA TTTTGTAAAG TCACGATTCC TGACCAACCA CGTGCCACCA
GGCTCCCCTA TAGCCGCTTC AATGTTTCTT GGAAGTCACG TGGCGGGACG TTCTGAGCTC
TACGTTCTGC GCTATCCAGA CGATCCTGGT GGGGTGCGAC TCCCCATTAT TATCGATAAA
ATCGATTATG CTGTCGCTGA TGCTCTATTT GACTGGAGAA CCACTATAAA TGGTCGTATG
GTCGGAGGAG TTGATTATGA GGCGAAGGAA ATATCAATCC TGCTGAACAA TTCTAATTTC
GGTTTGATCT ACCAGGAGGA CGGACTTCTT CTCTTTAAGA GGGGCGTAAC TGCCGAAGAA
TCATTGCTTC AGAAGATCGA GTTTGTGAAA GGTTATAAAC TAACACAAAA ACAGATAGCT
GATTTCGGTC CTGTGCGACT GCTCGAAGCC CGGATAGATT CGTCAGAAAA TCGGTTATTC
CGTGCTTATT TTTCCTGGAA GTTGGTAGGA GATTCGATAG ATCGACGCCT CATCGCCGTT
AGTCGTCTGG AAGGGGTAGA TGGCGGCAGA GTCGTCCATT TGCCGAGCGC TTTCCTGAAA
CCAACAAATA CATGGCCAAC AGACCACGTT GTCGTGGAGC AGTTTGAAAT TCGCCTTCCT
GCCGATCTAC CTCCTGGAAA CTATCGCTGG ATCACGGCGT GGTATGATCC AACACACACT
GACGCATACG CGACCGATCA ACGTAGTCGC ATCGGTAATG AAGTTGTGAT TGATACTATC
ACTATACGTT AG
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| Protein sequence | MRISPLSRNV IHDPVLWVAV IIYLVMIGWL SIARYMGFNA GVLDLGTMYQ AIASTLRGEP
LIVTSPQGNV SRLAGHFELI YYAFAPLIAL WPDPRVLLIG QTLLAASGAF PAYAIALRRL
DSVLAARSIV LIYLLYPVAL TAVLFDFHGD TLAMPMILWL VDALERRSRW SAVVWAGLCL
LCKVYVAVAV AAIGAYFFLW GGQRRVGLVT SVSAVAYGAL VFFVLRPLFE DAGGSRIHNN
YVEQYFGAFD TLLSTVGERL LNALVVVGPV LLLAWRGWRW LFVSTPILFA VLISTGPGTT
YHYAYHHYAL VVPFIVLSVI EGAEKLCHLV KVDQKNGIIS ASGNMVKSSV KTLNSFQRSW
RSDLVFCTVT TVLTSAALVD IPLNPTFWVG LPGLGVDQAS YGITSRDFVK SRFLTNHVPP
GSPIAASMFL GSHVAGRSEL YVLRYPDDPG GVRLPIIIDK IDYAVADALF DWRTTINGRM
VGGVDYEAKE ISILLNNSNF GLIYQEDGLL LFKRGVTAEE SLLQKIEFVK GYKLTQKQIA
DFGPVRLLEA RIDSSENRLF RAYFSWKLVG DSIDRRLIAV SRLEGVDGGR VVHLPSAFLK
PTNTWPTDHV VVEQFEIRLP ADLPPGNYRW ITAWYDPTHT DAYATDQRSR IGNEVVIDTI
TIR
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