Gene RoseRS_4383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4383 
Symbol 
ID5211367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5495813 
End bp5497420 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content60% 
IMG OID640597962 
Productglycosyl transferase, group 1 
Protein accessionYP_001278666 
Protein GI148658461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.315819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TGCGCATTGC AATCGACGCC CGTTTGAATG CCTATCGTAC CGGTGGCATT 
CCTCAATATA CGCGCCAGTT GATGGCTGCA CTTGCCCACG TTGCGACTGA TGACCAGATT
ATCAGTCTTC AGCATCGTGA TCATCTGCGC CCGCTAGTCG TCGCGCCGAA CGTTGCGCGC
CATCCACTCT TTACTCCGCC GCATCATCGC TTCGAACGCT GGATATTGCC GCTGGAAGTG
CTGATCACGC GACCTGACGT TCTCCATTTC CCGGATTTCA TTGCGCCTCG TTATCGATTC
TGCCCGACAG TCGTGACGAT CCACGATCTC GCATTTATGC GCTATCCTGA TATTCTTGAC
CGTGCCGCTG CTGCATATTA CCGGCAGGTG GGTGAAAGCG CTGCACGCGC TGATGCGGTG
ATTGCGGTTT CTGAAACGAC CCGGCAGGAT ATTGCTCAGT TTCTCGATCT TCCACCCGAG
CGGATCGATG TGATCTATGA GGCTGCTGCG CCGATCTACA CGTCGCTGTC GCTTCGTCCT
GGCGAGGCGC GGGTGTTATC GGGCGTGCCT CTGACTGAAG GCTCATTTAT GCTATTCGTC
AGCACCCTCG AACCGCGCAA GAACCTGCCG ACCCTGTTGC GGGCGCTGCG GATCTGTCTC
GACCGGCGAC CCGATCGCGG GTACCGGCTG GTGGTTGCGG GGGCGCGTGG ATGGCGTGAT
GAAGACATCT TCACGACAGT GCGCGATTTG CGCCTCGCGG ATGACGTCAT CTTTGCAGGA
CGTGTCGGTC AGTACGATCT GCGCTGGCTG TATAATGCAT GCCGTCTGTA CGTCAATCCG
TCGCTCTACG AAGGATTTGG TCTGCCATTG CTGGAAGCAA TGGCGTGTGG CGCCGCCTGT
CTTGCCTCAT CGAGTTCCAG CCTGCCCGAA ATCGGCGGTG ACGCGGTCGA GTATGTACCG
GCGCTCGATG CTGGCGCATG GGCGGATATG ATCGAGGCGC TGTGGGACGA TCCGGATCGT
CGCGCCACGA TGGGCCGACT CGCGCGTGCG CGGGCGGATC AGTTTTCGTG GCAGCGCACT
GCACGTGAGA CGCTGGCGGT CTATCGTCGC GTCGTCGCGC GCGTGCCGCG TCCATCCCCG
CTCCCCGTGG CGGTGAACGT CAATCCTTCT CTACCTGAGT CACCGGAACG ACTGGCGAGG
TGTATCCGCT GCGGGCAGCA TCTTGTGTCG GCGCCAACCG AGGGAACGAT CATCGTCGGC
GCGTCTCAGA AATGCCAGAT TGCTCCGAGA GCGTGGATGT GCCCTGATTG CGGTCACATC
GAACTGCTGG CAATACCGGC GGAAGCGCCA TTCCCTGCTG ACCGCGCTGA TTCTACCCCT
GTGATGTCGC AGCAACCGGA CGTTTCATCA GAATCGTTCG ATGTCGCCGT ATCTGCCGCC
CCGCAAGAGC CGGTATCGCT CTCCGACGAA GCGCCTGATC TGCCAGTCGA TCAGGCGCAC
GGAGACGAGA CGATCCCGGT AGCAGCGCCT GAGCGTGAAA CCGCGCATCC AGGCGACCTG
TCGTTGGGTA TGGGCGCCCA AAGGCAGGAA GGCGTCGAGG GGTCGTAA
 
Protein sequence
MSVMRIAIDA RLNAYRTGGI PQYTRQLMAA LAHVATDDQI ISLQHRDHLR PLVVAPNVAR 
HPLFTPPHHR FERWILPLEV LITRPDVLHF PDFIAPRYRF CPTVVTIHDL AFMRYPDILD
RAAAAYYRQV GESAARADAV IAVSETTRQD IAQFLDLPPE RIDVIYEAAA PIYTSLSLRP
GEARVLSGVP LTEGSFMLFV STLEPRKNLP TLLRALRICL DRRPDRGYRL VVAGARGWRD
EDIFTTVRDL RLADDVIFAG RVGQYDLRWL YNACRLYVNP SLYEGFGLPL LEAMACGAAC
LASSSSSLPE IGGDAVEYVP ALDAGAWADM IEALWDDPDR RATMGRLARA RADQFSWQRT
ARETLAVYRR VVARVPRPSP LPVAVNVNPS LPESPERLAR CIRCGQHLVS APTEGTIIVG
ASQKCQIAPR AWMCPDCGHI ELLAIPAEAP FPADRADSTP VMSQQPDVSS ESFDVAVSAA
PQEPVSLSDE APDLPVDQAH GDETIPVAAP ERETAHPGDL SLGMGAQRQE GVEGS