Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4383 |
Symbol | |
ID | 5211367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5495813 |
End bp | 5497420 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597962 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001278666 |
Protein GI | 148658461 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.315819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCA TGCGCATTGC AATCGACGCC CGTTTGAATG CCTATCGTAC CGGTGGCATT CCTCAATATA CGCGCCAGTT GATGGCTGCA CTTGCCCACG TTGCGACTGA TGACCAGATT ATCAGTCTTC AGCATCGTGA TCATCTGCGC CCGCTAGTCG TCGCGCCGAA CGTTGCGCGC CATCCACTCT TTACTCCGCC GCATCATCGC TTCGAACGCT GGATATTGCC GCTGGAAGTG CTGATCACGC GACCTGACGT TCTCCATTTC CCGGATTTCA TTGCGCCTCG TTATCGATTC TGCCCGACAG TCGTGACGAT CCACGATCTC GCATTTATGC GCTATCCTGA TATTCTTGAC CGTGCCGCTG CTGCATATTA CCGGCAGGTG GGTGAAAGCG CTGCACGCGC TGATGCGGTG ATTGCGGTTT CTGAAACGAC CCGGCAGGAT ATTGCTCAGT TTCTCGATCT TCCACCCGAG CGGATCGATG TGATCTATGA GGCTGCTGCG CCGATCTACA CGTCGCTGTC GCTTCGTCCT GGCGAGGCGC GGGTGTTATC GGGCGTGCCT CTGACTGAAG GCTCATTTAT GCTATTCGTC AGCACCCTCG AACCGCGCAA GAACCTGCCG ACCCTGTTGC GGGCGCTGCG GATCTGTCTC GACCGGCGAC CCGATCGCGG GTACCGGCTG GTGGTTGCGG GGGCGCGTGG ATGGCGTGAT GAAGACATCT TCACGACAGT GCGCGATTTG CGCCTCGCGG ATGACGTCAT CTTTGCAGGA CGTGTCGGTC AGTACGATCT GCGCTGGCTG TATAATGCAT GCCGTCTGTA CGTCAATCCG TCGCTCTACG AAGGATTTGG TCTGCCATTG CTGGAAGCAA TGGCGTGTGG CGCCGCCTGT CTTGCCTCAT CGAGTTCCAG CCTGCCCGAA ATCGGCGGTG ACGCGGTCGA GTATGTACCG GCGCTCGATG CTGGCGCATG GGCGGATATG ATCGAGGCGC TGTGGGACGA TCCGGATCGT CGCGCCACGA TGGGCCGACT CGCGCGTGCG CGGGCGGATC AGTTTTCGTG GCAGCGCACT GCACGTGAGA CGCTGGCGGT CTATCGTCGC GTCGTCGCGC GCGTGCCGCG TCCATCCCCG CTCCCCGTGG CGGTGAACGT CAATCCTTCT CTACCTGAGT CACCGGAACG ACTGGCGAGG TGTATCCGCT GCGGGCAGCA TCTTGTGTCG GCGCCAACCG AGGGAACGAT CATCGTCGGC GCGTCTCAGA AATGCCAGAT TGCTCCGAGA GCGTGGATGT GCCCTGATTG CGGTCACATC GAACTGCTGG CAATACCGGC GGAAGCGCCA TTCCCTGCTG ACCGCGCTGA TTCTACCCCT GTGATGTCGC AGCAACCGGA CGTTTCATCA GAATCGTTCG ATGTCGCCGT ATCTGCCGCC CCGCAAGAGC CGGTATCGCT CTCCGACGAA GCGCCTGATC TGCCAGTCGA TCAGGCGCAC GGAGACGAGA CGATCCCGGT AGCAGCGCCT GAGCGTGAAA CCGCGCATCC AGGCGACCTG TCGTTGGGTA TGGGCGCCCA AAGGCAGGAA GGCGTCGAGG GGTCGTAA
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Protein sequence | MSVMRIAIDA RLNAYRTGGI PQYTRQLMAA LAHVATDDQI ISLQHRDHLR PLVVAPNVAR HPLFTPPHHR FERWILPLEV LITRPDVLHF PDFIAPRYRF CPTVVTIHDL AFMRYPDILD RAAAAYYRQV GESAARADAV IAVSETTRQD IAQFLDLPPE RIDVIYEAAA PIYTSLSLRP GEARVLSGVP LTEGSFMLFV STLEPRKNLP TLLRALRICL DRRPDRGYRL VVAGARGWRD EDIFTTVRDL RLADDVIFAG RVGQYDLRWL YNACRLYVNP SLYEGFGLPL LEAMACGAAC LASSSSSLPE IGGDAVEYVP ALDAGAWADM IEALWDDPDR RATMGRLARA RADQFSWQRT ARETLAVYRR VVARVPRPSP LPVAVNVNPS LPESPERLAR CIRCGQHLVS APTEGTIIVG ASQKCQIAPR AWMCPDCGHI ELLAIPAEAP FPADRADSTP VMSQQPDVSS ESFDVAVSAA PQEPVSLSDE APDLPVDQAH GDETIPVAAP ERETAHPGDL SLGMGAQRQE GVEGS
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