Gene RoseRS_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4374 
Symbol 
ID5211358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5487438 
End bp5487704 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content57% 
IMG OID640597953 
Producthypothetical protein 
Protein accessionYP_001278657 
Protein GI148658452 
COG category[S] Function unknown 
COG ID[COG3514] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00628463 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAA GAACCAGACC AACAACTGAC TGGGCGCGCA TCGATGCGAT GACCGACGAT 
GAAATCGATA CCTCGGATAT TCCGCCCTTA ACCGAAGAGT TCTTCAAACG AGCAACGGTG
CGGCTGCCCA GGCACACGGT CACGGTGACG ATCCAGGTTG ACCCGGATGT CCTGGCATGG
TTCAAAGCCC AGGGTGATGA CTACGAACAA CGGATGCAGG CCGCTCTCCG CATCTATGCA
GAGGCGCACA AGGACCTCCA GCGCTAA
 
Protein sequence
MSGRTRPTTD WARIDAMTDD EIDTSDIPPL TEEFFKRATV RLPRHTVTVT IQVDPDVLAW 
FKAQGDDYEQ RMQAALRIYA EAHKDLQR