Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4364 |
Symbol | |
ID | 5211348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5482854 |
End bp | 5483621 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640597945 |
Product | SseB family protein |
Protein accession | YP_001278649 |
Protein GI | 148658444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.606742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.252372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC CAGTCAACGA TCTGGAAAGA TCACTCATGC GCGCTGCGCT GAACCCATCT TACAGGCCAC AGTTTTATCG TGATTTGTTG GAAGCAGACA TTTTTATTAT TAACTATGCT GAAAGCGATT CCGAGGAGCA AAACAACACC ATGTCGGAAA GTTTTGAATT GAAAGTCCCC AAAATTGAAA GGAACGGACA GGCCTGGTTG CCTGTTTTTT CGTCTCTACA ACGATTACAG GAATTTATTA GTTCTGAGAC GGCATATGTA GTACTAAAAG GAAGAGATTT CTTCGAGCTT ACCAGGGATG TCCATATTGT ATTAAATCCT GATTCTGATT ATGGAAAGGA ATTCATTCCG CAAGAGATTG AGCGAATGTT AGACGGGTCT ATTTTCCAGC CTGACCAAAG ATACACTGCC CAGGAAGAGA CTGCATTCCT CATTGGGCGG CCTGCTGTTT ACCCTACCAG TCTGGTCAAA GCATTGTGCG AGTATTTTGC AAAAAACAAA TTCGTAAATC GGGCATACCT GGTACAGTTC TACAATCCGA AAAGTGGTGA ACCACCTCAT TTGCTGATAG CCATTGACGC CAGTAGGGAT TGGGAGAGAA TTGTTGGTGA TGCTGGGGTG ATTAGCTCTG AAGTTATGGG AAAAGATGAC ATTGTTGATT TCATGCGTTT GGATGACTCT GATTTCTCTC AGCATATTAT TAACTCGACA CGACCTATCT ACCAGAAATC TTTCCTGAAG AAACTGTTTG GGTATTGA
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Protein sequence | MFEPVNDLER SLMRAALNPS YRPQFYRDLL EADIFIINYA ESDSEEQNNT MSESFELKVP KIERNGQAWL PVFSSLQRLQ EFISSETAYV VLKGRDFFEL TRDVHIVLNP DSDYGKEFIP QEIERMLDGS IFQPDQRYTA QEETAFLIGR PAVYPTSLVK ALCEYFAKNK FVNRAYLVQF YNPKSGEPPH LLIAIDASRD WERIVGDAGV ISSEVMGKDD IVDFMRLDDS DFSQHIINST RPIYQKSFLK KLFGY
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