| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4328 |
|---|
| Symbol | |
|---|
| ID | 5211312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5433170 |
|---|
| End bp | 5434036 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640597912 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278616 |
|---|
| Protein GI | 148658411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.300835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTG TTCTCGTTTA TCTTCTGATC ACGCCGCTCC TGCTGTTCAT CGCCTCTGGT
CGATCTGTAA CCCCTGCTCA CGCCATTCCT GCTGCTCTGG CTGTGATGCC TGCTGCTACC
ACCTTACTTC GGGGAGACGA CCTGTGCATC TACCGTCCGT CAGTGCTGCG CTTCTTCTGC
GATACTGCCC GTGACGGCGG GGATGCCGAG TTTGTTGTGG CGTTCGGCGT CGCCGGGGAT
ATTCCCCTGC TCGGTGATGT TAACGGCGAC GGGCGCGATG ACCCGTGCAT CTACCGTCCG
TCAGTGCTGC GCTTCTTCTG CGATACTGCC CGTGACGGCG GGGATGCCGA GTTTGTTGTG
GCGTTCGGCG TCGCCGGGGA TATTCCCCTG CTCGGTGATG TTAACGGCGA CGGGCGCGAT
GACCCGTGCG TCTATCGTCC GTCGGTGCTG CGCTTCTTCT GCGACACTGC CCGTGACGGC
GGGGATGCCG AGTTTGTTGT GGCGTTCGGC GTCGCCGGGG ATATTCCCCT GCTCGGTGAT
GTTAACGGCG ACGGGCGCGA TGACCCGTGC GTCTATCGTC CGTCGGTGCT GCGCTTCTTC
TGCGACACTG CCCGTGACGG CGGGGATGCC GAGTTTGTTG TGGCGTTCGG CGTCGCCGGG
GATATTCCCC TGCTCGGTGA TGTTAACGGC GACGGGCGCG ATGACCCGTG CGTCTATCGT
CCGTCGGTGC TGCGCTTCTT CTGCGACACT GCCCGTGACG GCGGGGATGC CGAGTTTGTT
GTGGCGTTCG GCATTACTGA TGATATTCCG CTCATCGGAA ATGTTGGGCG ACCATTCGGT
GTGGCGTTGC CATTGGTGAT ACGGTGA
|
|---|
| Protein sequence | MKPVLVYLLI TPLLLFIASG RSVTPAHAIP AALAVMPAAT TLLRGDDLCI YRPSVLRFFC
DTARDGGDAE FVVAFGVAGD IPLLGDVNGD GRDDPCIYRP SVLRFFCDTA RDGGDAEFVV
AFGVAGDIPL LGDVNGDGRD DPCVYRPSVL RFFCDTARDG GDAEFVVAFG VAGDIPLLGD
VNGDGRDDPC VYRPSVLRFF CDTARDGGDA EFVVAFGVAG DIPLLGDVNG DGRDDPCVYR
PSVLRFFCDT ARDGGDAEFV VAFGITDDIP LIGNVGRPFG VALPLVIR
|
|---|
| |