Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4298 |
Symbol | |
ID | 5211282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5395996 |
End bp | 5396556 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597884 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001278588 |
Protein GI | 148658383 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.943714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGACTTC TAACCTTCAG CCTCAATGTA ACCCTGGACG GTTGCGTCGA CCACCGGGAG GGAATCGTCG ACGACGAGAC ACACGCTTTC TTCACCCGCC TCATGGACGA GGCAGGAGCG ATGCTGTGGG GCCGCGTTAC CTACGAGATG ATGGAGAGCT ACTGGCCATT GGTCGCCCGC GGCAACGTGG AGGCGCCGCC AGCGATGCGC GATTGGGCGG TCAAGCTGGA GGCCAAGCCG AAGTACGTGG TGTCGTCGAC GCGAACGAAC TTCCCGTGGA CCAACAGCCA TCACATCGCC GGTGACTTGC GCACGAGCAT ACAGAAGCTC AAGGACGCAA CCCCGGCTAG CGTGCTTCTC GGTAGCAGCA AGCTTGCGAC TGAGCTCGAT CAGCTGGATC TGATCGACGA GTACAAGTTC CTCGTCCATC CCAGGATTGC CGGCCGCGGC CCGACCCTGT ACCAGAGCGG ACTATCCAGC ACGCGACGAC TCGAGCTGGT CTCAGCGAAG CCCCTCCGCA ACGGTGCGGT CGCCATGCAC TACCGGCGGG CGCGCGGCTA A
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Protein sequence | MGLLTFSLNV TLDGCVDHRE GIVDDETHAF FTRLMDEAGA MLWGRVTYEM MESYWPLVAR GNVEAPPAMR DWAVKLEAKP KYVVSSTRTN FPWTNSHHIA GDLRTSIQKL KDATPASVLL GSSKLATELD QLDLIDEYKF LVHPRIAGRG PTLYQSGLSS TRRLELVSAK PLRNGAVAMH YRRARG
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