Gene RoseRS_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4263 
Symbol 
ID5211248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5345631 
End bp5346821 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID640597852 
Productglycosyl transferase, group 1 
Protein accessionYP_001278556 
Protein GI148658351 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC GGGTGGCGCA TATCACAACG GTCGATCAGT CGCTGCGCTA TCTGCTGCTC 
AACCAGATGC GCAGCATCGC TCAGGCGGGC TATGAGGTGA CCGGCATCTC CGCGCCGGGG
AGCGACGTTC CGGTTATTGA GTCGATGGGC ATCCGCCACA TCGCTGTCCC CCTCACGCGA
CGCCTGACGC CCTTCGCCGA TCTGCGCGCG CTGGTGCATC TGTACCGCAT CTTTCGACGA
GAACAATTCA CGATTGTGCA CACTCATACC CCCAAACCGG GACTGCTGGG ACAACTGGCG
GCGCGCATGG CGGGGGCGCC GGTGGTGGTC AACACCATCC ACGGCTTTTA TTTTCACGAG
CACATGCCGC CTGCGCAGCG GCGCTTCTAC ATTGCAATGG AACGCATCGC AGCTCGTTGC
TCCGATCTCA TCCTCTCGCA GAGCCGCGAG GACCTGGATA CCGCCATCCG GCTGGGCATC
TGTCCACGCG AGCGCATTCA GCTGCTCGGC AACGGCATCG ATATCCAGCG CTTTGATCGG
AACCGGGTCG ATCCAGCAAC CCTGGCGCAC CTGCGCTCGA CGCTGGGATT GCCGCCGGAC
GTCCCGGTGA TCGGGTTCGT CGGGCGATTG GTGGTCGAAA AGGGTATTCT CGAACTGGCG
CGCGCCGTTC AGCAGGTACA GTCGCGCTTT GGTCCGGTAA CACTGCTGAT CGTCGGCGGC
GTTGATCGAG AAAAAGCAGG GGCGCTCAAC CACGAGGACA TTCAGGCGGC TGCGGGAACG
GCGACATGCA TCTTCGCCGG GGTTCGCCAG GATATGCCCG ACATGTATGC ATTGATGGAC
GTATTTGCGC TACCTTCGTA CCGTGAAGGA TTTCCGCGCG CGCCGATGGA GGCGTCGGCG
ATGGGAGTCC CGTGCGTGGT TACCAATGTG CGCGGTTGTC GCGAGGCGGT GGAGCACGAA
CGCAACGGGC TGATCGTGCC GCTGCGTGAC GTGGATGCGC TGGCGGAGGC GTTGATCAGC
CTGTTGCGCG ATCACGACCG ACGCAGGGCG ATGGGTGATG CCGGACGCAG GATGGCGCAT
GAGCAGTTTG ACGAACGGCT GGTGTTTCAA CGGGTTCTTG CCGCATACCA TCGGCTCCTG
CACGAAAAAG GCGTCCAGGC GTCGGAGAGC GCGGCGACCG GCAAGGCATA G
 
Protein sequence
MTLRVAHITT VDQSLRYLLL NQMRSIAQAG YEVTGISAPG SDVPVIESMG IRHIAVPLTR 
RLTPFADLRA LVHLYRIFRR EQFTIVHTHT PKPGLLGQLA ARMAGAPVVV NTIHGFYFHE
HMPPAQRRFY IAMERIAARC SDLILSQSRE DLDTAIRLGI CPRERIQLLG NGIDIQRFDR
NRVDPATLAH LRSTLGLPPD VPVIGFVGRL VVEKGILELA RAVQQVQSRF GPVTLLIVGG
VDREKAGALN HEDIQAAAGT ATCIFAGVRQ DMPDMYALMD VFALPSYREG FPRAPMEASA
MGVPCVVTNV RGCREAVEHE RNGLIVPLRD VDALAEALIS LLRDHDRRRA MGDAGRRMAH
EQFDERLVFQ RVLAAYHRLL HEKGVQASES AATGKA