Gene RoseRS_4177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4177 
Symbol 
ID5211161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5231359 
End bp5232207 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID640597766 
Producthypothetical protein 
Protein accessionYP_001278471 
Protein GI148658266 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.122374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAG AAGACTGGAC AGCCTGGATC GGTCGGACGG AGCAGGTTGA GGACGACATC 
AGCCCGGCGC AGGCGGCAGC GGCGGCGGCA ACGCTTGAAC CACCCCCGCC GTTACCAATG
AAAGGCTCGG CGCTGCCACC GCTCTGGCAC TGGTTCTACT TCCTGCCTCG TGCACCGCAG
TCACAACTCG GCATAGACGG GCATCCGCAA CGTGGCGGTT TCATCCCCCC TATCCCTTAC
CCGCGTCGCA TGTTTGCCGG CGCGCGCATC CGCTTTCACC ATCCGCTCAT CATCGGGCAA
CCTGCCCGAC GCGAGGGGGT TATCCGCAAT GTCACCCTGA AATCGGGACG CAGCGGTCCA
CTCGCATTCG TCACGGTCGG CTACGATATC TACCAGGAGA ACACGCTGTG CATTGAAGAG
GAACAGGATA TTGTGTACCG CGAGCCGGGC GCTGCCGTGC CTGCGCCTGT GCCGATCGAC
CTGCCGCCGC CGCCGGAGGG TGCATGGGTC CGTACCGTTA CGCCGGATAC GCGCCTTCTT
TTCCGCTTCT CGGCGCTGAC GTTCAATGCC CATCGCATCC ATTACGACCG ACCCTACGCC
CGCCATGAAG AAGGGTATCC GGGGTTGGTC GTCCACGGAC CGTTGACCGC TGTCATGCTC
ATGGAACTGG TGCGCCACAA CACCGCTCGC CCGATTGTCG GCTTCAGTTT TCGCAGCCAG
GCGCCACTGT TCGACCTGGC GCCATTTCGG TTGATCGCCC GCCCCGATGG GGATCGCGTC
GAACTGGAGG CGCAGGGACC CGACGGCGCA ACGGCGCTCA GCGCTGTGGT GGAACTGGGG
GAGAGTTGA
 
Protein sequence
MTSEDWTAWI GRTEQVEDDI SPAQAAAAAA TLEPPPPLPM KGSALPPLWH WFYFLPRAPQ 
SQLGIDGHPQ RGGFIPPIPY PRRMFAGARI RFHHPLIIGQ PARREGVIRN VTLKSGRSGP
LAFVTVGYDI YQENTLCIEE EQDIVYREPG AAVPAPVPID LPPPPEGAWV RTVTPDTRLL
FRFSALTFNA HRIHYDRPYA RHEEGYPGLV VHGPLTAVML MELVRHNTAR PIVGFSFRSQ
APLFDLAPFR LIARPDGDRV ELEAQGPDGA TALSAVVELG ES