Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4144 |
Symbol | |
ID | 5211128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5189723 |
End bp | 5190967 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640597733 |
Product | hypothetical protein |
Protein accession | YP_001278438 |
Protein GI | 148658233 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCAC AAGAACCGGC TGCGCTTCGT CCTGCACTGG GGCGTTTTCA GCAAGTCGCT CTCATTGTCG GTAGTGTTGC GATGCTGCTG GCAGTGGCGG GGGCGTTTTT AGGAGCAGCG CAGTTCTTTC ATTCGTACAT CTTTGCCTAT TTCTTCTGGT TTGCCCTGTC GCTCGGCGGG TTGCTGGTGC TTATGATCAA CCATCTGACG CAGGGTGTGT GGGGGTTGAT GCTGCGGCGC CTGCTGGAAG CGGCGGCGAT GACCCTGCCG TTGATGGCGA TCCTGTTCCT GCCAATTGCT ATCGAAACAC TGACCGGAAC CCACTATCTG TTCCCGTGGA CGAATCCGGA AGTGGTCGCA AACGATGAAG TGGTGGCGCT GAAGACGCCG TACCTGAATG TGCCGTTCTT CCTGGCGCGC GCAGTGATCT ACTTTGTGCT GTTCGTTGGT ATGGCGTATC TGCTGCGTCA ATGGTCGCTG GAGGAGGATG CGAAAGGGTT CAGCGAGGAT TTGCGCGGTC GCTTCCAGCG TCTGAGCGGT CCCGGCATTG TTGTGCTGGT GCTGGCGTGG ACGCTCGCCG CAACCGACTG GGGGATGTCG CTGGAGCCGG AATGGTTCTC GTCGATGTAC CCGGTGACCT ATATCGCCAG CATGCTGATC CTGACGTTTG GCGGCGGGAT TATTGCGCTG GCGGCGCTCA AAGCGCGCAA TTTGTTGCCG TTTGGCATCC CAACCGACCG CCTGCACGAT CTGGGCAAGT TTCTGTTTGC CTTCGTGGCT GTCTGGGCGT ATGTCAACTT CTCGGAATAT CTGATCATCT GGTCGGGAAA TGTGCCGGAA CTGACGCCGT GGCATGGGCA TCGCTCGGCA GGCGGGTGGG AGATCCTGGG GATCGCAATG ATCTTCGGCC ACTTCCTGCT CCCGTTTATG CTCCTGCTGA GCCGCTTTGC CAAGCGTCGG ATCGCAAATC TGACGGCGAT TGCGGCGTAT ATGTTTGTGA TTGAAATTGT CTGGTACTTC TGGAAGATTA TGCCAGCGTT TCATCCAGAC GGGTTCCATA TCCACTGGCT CGATCTGGTG ACCCTGATTG CGATTGGCGG ACTGTGGCTT GGAACGTTTG CGTGGCATCT GCAGCGGGCG CCGTTGCTTG CACCGAACGA TTACCGCGTG CCGTTGTTGC GTCGCCAGGA AGCGGGTGGT CATGGGCACG GCCACCACGG GAAGGCAGCA GTGGAGCATC ACTGA
|
Protein sequence | MIAQEPAALR PALGRFQQVA LIVGSVAMLL AVAGAFLGAA QFFHSYIFAY FFWFALSLGG LLVLMINHLT QGVWGLMLRR LLEAAAMTLP LMAILFLPIA IETLTGTHYL FPWTNPEVVA NDEVVALKTP YLNVPFFLAR AVIYFVLFVG MAYLLRQWSL EEDAKGFSED LRGRFQRLSG PGIVVLVLAW TLAATDWGMS LEPEWFSSMY PVTYIASMLI LTFGGGIIAL AALKARNLLP FGIPTDRLHD LGKFLFAFVA VWAYVNFSEY LIIWSGNVPE LTPWHGHRSA GGWEILGIAM IFGHFLLPFM LLLSRFAKRR IANLTAIAAY MFVIEIVWYF WKIMPAFHPD GFHIHWLDLV TLIAIGGLWL GTFAWHLQRA PLLAPNDYRV PLLRRQEAGG HGHGHHGKAA VEHH
|
| |