| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4107 |
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| Symbol | |
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| ID | 5211090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5147091 |
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| End bp | 5148650 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640597695 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001278401 |
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| Protein GI | 148658196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.758696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGA TACCGGCGAT CATGCGCAAA AACCTGGTGT TGATCATCAC CCTGGCAGTC
ATGCTCATGC TCTTTGTTGC AGCCGCAAGC GGTATGAGCT GGCAGGATTT CGTCATAACC
CTGTTGCGTG GTCTGGCAGT GGGAGCGTTG ACATTCCTGG TGGCGTCCGG TTTTTCGCTT
ATCTTTGGGT TGCTCGACGT GCTCAATCTG GCGCACGGCA CACTTTTCAT GGTTGGCGCG
TACATTGGCT GGACAGTGTA TGTACGTCCT GATACATTTG TGGATATTCT GACGCCGCTT
GCGCTGATCA TCAGTGGATT CACGCTGGGG GACGTATGGA GACTGCTGGC GCGGCGCGTA
CCGCAGTCGG GCGTGTGGAG GCGGGTGTTG CCGTGGGTGG CGATCATGCC CGGTGTGCTG
ATCGGCTTTG GGGTCATGCG TGGCTACCCG ATTGCGTCCT GGAGTCTTGA GAATTATGCT
GAAAGTCCCG TCACGTTTTC ATTTCTCGCC AGTCAGGGGC AGCGCGTGAT CCCTGCGCCT
GCCACCTTTG GTGATGGCTC TCCGCTGATA GCATTCGGCG GGTTGATCCT GGCAAGTATG
CTGGTAGCGT TTGGACTGAC GCTGCCAGGG CAGAGCCACA TCCATACAGC AGCACATGTA
TCGTGGCGTC ATGGTGTGCC CTTTGCCAGT CTTATTGCGG GAGGGCTGGT TGTGTTTATC
GTCAATGAGC CGCTCACCGC GTGGTTGTTT GCACTGGATA CCAACTGGTT GTTCCTGATC
GCAGTGCTGG CGGCAGTGTT GAGCGGTATG GGGCTTGGTG CACTGATGGA GTCGACATTG
ATCCGACCGC TGTATGTGCG CCCGATCTAT CAGTTGATGC TCACTCTGGG GCTGAGCGCA
ATCGGGATTG AGATAGTGCG CGCGATCTGG GGGCGTCCCG AGTTCACCAT GCCCAAACCG
GCGCTGTTCG CCGGAAGCGG CGAGGGATGT CCGGCAGAGT CGCTCTGGCT GGCGCTGCAG
AATAGTTGTT CGACGATGCT GTTCCAGGGT GGGCGCATTC GCATCTACAA TGAGATGTTT
ATCCCCCTGG TCGGGCTGAT TGTGTTGATT GCCGTGTGGC TGTTGCTCAG GCGCACTCGC
CTTGGCATGA TCATTCGCGC TGGCGTGCAG GATCGTGAGA TGGTCGAGGC GCTGGGGATC
AATGTGCGAC GGGTGTTCAC AATGGTGTTT GCGCTGGGCG TGGGGTTGGC GGCGTTGGGG
GGTGTGCTGG CGGCGCCGTC GATCGGGCTT TCCAACACGA TGGGCGAAAG TTTTCTGCTC
AATGCGCTTA TTGCGCTGGC TATCGGCGGA TTAACCAGTT ACCCCGGCGC GGCAATCGGT
TCGTTGTTGG TCGGAATGCT TCAGCAGTTC ATCATCAAGT ACGGTCAGAT TGGCATTGCC
ATCCCGTTGA CCGGGATTGT TTTCAAACCT TCGCCGCCGC TGGTGCCCGC ATCGACTATT
CTGCTCATGG TGATCATTTT GCTCATTTTG CCCAACGGTC TGCTTGGCAG GAAGGAATAA
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| Protein sequence | MEQIPAIMRK NLVLIITLAV MLMLFVAAAS GMSWQDFVIT LLRGLAVGAL TFLVASGFSL
IFGLLDVLNL AHGTLFMVGA YIGWTVYVRP DTFVDILTPL ALIISGFTLG DVWRLLARRV
PQSGVWRRVL PWVAIMPGVL IGFGVMRGYP IASWSLENYA ESPVTFSFLA SQGQRVIPAP
ATFGDGSPLI AFGGLILASM LVAFGLTLPG QSHIHTAAHV SWRHGVPFAS LIAGGLVVFI
VNEPLTAWLF ALDTNWLFLI AVLAAVLSGM GLGALMESTL IRPLYVRPIY QLMLTLGLSA
IGIEIVRAIW GRPEFTMPKP ALFAGSGEGC PAESLWLALQ NSCSTMLFQG GRIRIYNEMF
IPLVGLIVLI AVWLLLRRTR LGMIIRAGVQ DREMVEALGI NVRRVFTMVF ALGVGLAALG
GVLAAPSIGL SNTMGESFLL NALIALAIGG LTSYPGAAIG SLLVGMLQQF IIKYGQIGIA
IPLTGIVFKP SPPLVPASTI LLMVIILLIL PNGLLGRKE
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