Gene RoseRS_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4071 
Symbol 
ID5211054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5103600 
End bp5104337 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID640597659 
Producthypothetical protein 
Protein accessionYP_001278365 
Protein GI148658160 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGAT ATATCTTCAC CGGAAAGCGT CTGATTGCCA CCTTCCTCGT TCTGATCGGC 
GCAGTGGCGC TGTGTGGATT GGGGATGTGG CAGCTTGACC GTCACTCTCA GCGTGCTGCA
TTGAATGCGC GCATTGCCGC AGGGCTGGCG CAACCCCCGG TGGCGCTGGA AACGGTGGAC
GATCTCCAGT CGCTCGACTA CCGCCCCGTT ACTGCGCGCG GCGCGTTCGA CCCGACGCAC
GAAGTGCTGC TGCGAAACCG TTCGTTCAAT GGGGTGACCG GCTATCACGT GATTACGCCG
CTGCGCCTGA GCGGTCGAAA TGAAGCGGTG CTCGTTGATC GGGGATGGAT TCCGTTGACC
GAAGCGTCTC CAGAGGCGCG GCGCAAATTT GCTCCCCCTG CCGGCGAGAT GGTCGTGACC
GGCATTGCCA GACAGCCTGA AACGTATGTC GGCGGACCGC AGGATCCTCC GTTGAGTCCG
GAGCGACCAC GCCTCGATGC CTGGTTTCGC GTCGATGTTG CGCGGATTCA GGAACAGACG
CCTTATCCGC TGCTGCCGCT GTTCATCGAG GTGCAGCCGA TCCCCGGCGC AGAACCGACG
CTGCCGCAGC CGGTTCCGCT GCCTGAACTC GACCAGGGAC CGCACCTGGG ATATGCCATT
CAGTGGTTCG CATTCGCCGG CATTCTGGTG GTCGGCTATG TTGTGTTGCA GCGGAATACG
TTACGGGGCG AAGGGTGA
 
Protein sequence
MVRYIFTGKR LIATFLVLIG AVALCGLGMW QLDRHSQRAA LNARIAAGLA QPPVALETVD 
DLQSLDYRPV TARGAFDPTH EVLLRNRSFN GVTGYHVITP LRLSGRNEAV LVDRGWIPLT
EASPEARRKF APPAGEMVVT GIARQPETYV GGPQDPPLSP ERPRLDAWFR VDVARIQEQT
PYPLLPLFIE VQPIPGAEPT LPQPVPLPEL DQGPHLGYAI QWFAFAGILV VGYVVLQRNT
LRGEG