Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3935 |
Symbol | |
ID | 5210918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4922236 |
End bp | 4924935 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640597531 |
Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
Protein accession | YP_001278238 |
Protein GI | 148658033 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.410503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACTGT CTGCAACCTG CATCCACTGC GGTGCGCCGT TGAGCCGTCC CGGTGCAAAG TTTTGCACCC GCTGCGGTAA ACCGCAGGAG ACGGCCGCTC CGGTCACGTC AACATCGGCG ATTGGGGCTT CTTCACCTGA CAGCGCCTCC CAGAAAACCC AGATATTCAC GAGCCAGGGA TCGACGTCTG CGCCGCCTGC CTACGCTACG AGCGGCGAAG GCGCATCGCA GGGCGGCGCA CCGCTCTCAG GACCGCTCCT GATCGTTCAG GATGTCGGAC AAACGTTCGA GGTCGCACTT GGTCAGCAAC CGCTCTCCAT CGGGCGCGCA CCCGATAATG ATATTGTCAT CACCTCGCGG TTCGTCTCCG GTCGTCACGC GCGGATCGAA CCGCATGGCA TCGCCCACCA GATCGTCGAT ATTGGCAGCA CCAATGGTTT ACTCTTTGAG GGAAAGCGAC TTCCCGCCAA TACGCCACAT GTGCTGGCTG ACAGTGATGT CCTGCGGATT GGCGATCCGG CGACCGGTAA TTTCGTCACC CTGACCTACC GCAACCCCCA GGCGCCGAAA GTGCAGCAGG CTGCCGCCGT GGCGCGCAGT TACCGCCTCG ACCCGACCGA CCCGCAGATT ACGATTGGTC GTGAAGGATG CGAGATTCTG CTCGACAACC CGCAGGTGTC GCGTAAACAT GCGGTCATCG ACCGTGTGAA CGGAAAACAC GTTCTGCGCG ATGTGGGGAG CACTAACGGC ACGTTCGTCA ACGGGCGACG CATTACCGAG CATACACTGG TCAAAGGCGA CATCATTCAG ATCGGTGCAT TCAAACTGGT CTACACCGGT GAAAGCCTCG ATCAGTACGA CCAGCGCGGC GCGTTGCGCA TCGACGCGCG CAACCTGTGG CGCGAAGTGT CGCGCGACGG CAAAACCCGC ATGATTCTGA AGGATGTATC GCTTTCGATT GCACCGCGTG AGTTCGTTGC GCTCGTCGGC GGCAGCGGCA CCGGCAAGAG CACCCTCCTC AACGCCCTGT CCGGCTTCGT GCAGGCAACC CACGGCAGCG TCCTGGTCAA CGGCGACGAT TACTACCGCA ATTTCGACGC CTACCGCGCG GTGCTTGGCT ACGTGCCGCA GGACGACATC CTCCACCGCA CGCTGCCAGT CGAACGCGCG CTCGGGTACG CAGCCGAACT CCGCCTGCCC GCCGATACAG CGCCAGCAGA AATCCGTCAG CGCATCGACC GGGTGCTCGA CGACGTCGAA ATGACGCCGC ACCGCGAAAA ACCGATTGAA AATCTGTCGG GCGGGCAGCG CAAACGGGTC AGTATTGGCG CCGAACTGCT GGCTGATCCT TCGCTCTTCT TCCTGGACGA ACCCACCTCC GGTCTCGACC CCGGTCTCGA AAAGAAGATG ATGTACACCC TGCGTCGCCT GGCGGATAGC GGTCGAACGA TTATCCTGGT GACCCACGCA ACTGCCAATA TCAATGTCTG CGACCACGTC GCCTTCATGT CGGACGGGCG CATGGTGTTT TTCGGTCCGC CAGCCGAGGC GCTCAAGTTC TTCGGTGTGG CAAGCGGCGA TTTTGCCGAC ATCTACACCC GCATCGACGG GCTGGCTGAC CCGAATGACC CCGAACGGTG GGCGATTGTG CAACGCGACC TCCAGGCGGA GTATGCCGCC TGGCAGCACC ATCATCAGCA GACATCAGGC AACAGCAAAC CGACGGTTCC GACGCTCGCG GAATTGTGGG AAATGAAGTT CCGCGCCTCG CCGCAGTATG CCACGTATGT GACTGGACGA CTGGCGGAGG CGCCGGCGGG TCCAGTTTCC GGCAGCGCCG GGGACGATGG CGCCACCAAA CGACCGGGCG TCTCATCACT GCGACAATTT GGCATCCTGG TGCGCCGGTA CTTCGACCTG ACCCTGCAAG ACCGGCGCAA TCTGGCGATC CTGCTGCTCC AGGCGCCGAT TATCGGTCTT CTGCTGATGC TCGTCGCCAA AGCGGATGCT ATCGTTGGCG AGAACGCCTT TGCGAACGAA GCCAAAAAGG TGCTTTTCAT GCTGGCAACA GTCGGCGTCT GGTTCGGCAT CATCAATGCT GCGCGCGAGA TCACCAAAGA AGCGCCGATA TACCGGCGTG AACGTCTGGC AAATCTGCGC ATCGGTCCGT ATGTCCTGTC GAAGGTGGTA GTGCTGCTCC TGCTGGTGAT TCTCCAGAGC GCCGTGCTGC TCGCACTGGT CGGCTTGAAG GTGCAATTCC CTGAGCAGGG GGTGATGCTG CCGATCCAGC TGGAACTGTT CATCACCGCT GTATTGACGT CGCTGGCTGG AATGGCGATG GGGCTGGCAA TCTCGGCATT CGCGGCAACG CCGGATCGCG CGATTTCGCT GGTGCCGCTG GCGCTCATCC CGCAGATCAT TTTTGCTGGG GTCATTTTCA GTCTTGGGGA TGGCATCACG GTTCAGCGCG TCCTCTCGTG GTTGACGATC AGCCGCTGGG CGATGGATGC CTATGGCACC TCGGTCAATA TCAACAGCCT GCCGCTGCAA CCGGGGATGC TGCGCCTGCC CAATCCACCA GAGGAGTACA CCTTCACTCC AACCCATCTG CTCTCACGCT GGGGCATCCT CCTGGGCTAC ATGGTTGTGT GTCTGGCACT CACCGCCTGG CAACTGCACC AGCGCGACCG GCAACGGTAG
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Protein sequence | MSLSATCIHC GAPLSRPGAK FCTRCGKPQE TAAPVTSTSA IGASSPDSAS QKTQIFTSQG STSAPPAYAT SGEGASQGGA PLSGPLLIVQ DVGQTFEVAL GQQPLSIGRA PDNDIVITSR FVSGRHARIE PHGIAHQIVD IGSTNGLLFE GKRLPANTPH VLADSDVLRI GDPATGNFVT LTYRNPQAPK VQQAAAVARS YRLDPTDPQI TIGREGCEIL LDNPQVSRKH AVIDRVNGKH VLRDVGSTNG TFVNGRRITE HTLVKGDIIQ IGAFKLVYTG ESLDQYDQRG ALRIDARNLW REVSRDGKTR MILKDVSLSI APREFVALVG GSGTGKSTLL NALSGFVQAT HGSVLVNGDD YYRNFDAYRA VLGYVPQDDI LHRTLPVERA LGYAAELRLP ADTAPAEIRQ RIDRVLDDVE MTPHREKPIE NLSGGQRKRV SIGAELLADP SLFFLDEPTS GLDPGLEKKM MYTLRRLADS GRTIILVTHA TANINVCDHV AFMSDGRMVF FGPPAEALKF FGVASGDFAD IYTRIDGLAD PNDPERWAIV QRDLQAEYAA WQHHHQQTSG NSKPTVPTLA ELWEMKFRAS PQYATYVTGR LAEAPAGPVS GSAGDDGATK RPGVSSLRQF GILVRRYFDL TLQDRRNLAI LLLQAPIIGL LLMLVAKADA IVGENAFANE AKKVLFMLAT VGVWFGIINA AREITKEAPI YRRERLANLR IGPYVLSKVV VLLLLVILQS AVLLALVGLK VQFPEQGVML PIQLELFITA VLTSLAGMAM GLAISAFAAT PDRAISLVPL ALIPQIIFAG VIFSLGDGIT VQRVLSWLTI SRWAMDAYGT SVNINSLPLQ PGMLRLPNPP EEYTFTPTHL LSRWGILLGY MVVCLALTAW QLHQRDRQR
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