Gene RoseRS_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3911 
Symbol 
ID5210894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4897789 
End bp4898970 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID640597507 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001278214 
Protein GI148658009 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA CAAACGACAT TGTGATCATC GGCGCGGCGC GCACACCGAT CGGGAAATTC 
CAGGGTATGT TTCGCGCCAT CTCCGCCACC GACCTGGGTG CACACGTCGT TCGGGAAGCC
GTTGCGCGCG CAGCGATTGA CCCGTCGCAG GTCGATGAGT GCATTCTGGG AAATGTGGTC
AGCGCCGGGC TTGGGCAGGC GCCTGCCCGT CAGGCGGCGC TGCGCGGCGG TCTCCCGGAA
TCGGTCGGCG CGCTGACGAT CAACAAGGTC TGCGGCAGCG GTCTCAAGGC GGTGACGCTG
GCTGCCGCGC TCATCCGCTC CGGTGAAGCG TCGCTCATCG TTGCTGGCGG GATGGAAAGC
ATGTCGCGCG CACCCTACCT GCTGCCCCAG GCGCGGAGCG GGTATCGCCT GGGAAACGCT
GAACTGATCG ACTCGCTCAT CCATGACGGG CTATGGTGCG CATTCGAGCA CCACCATATG
GGGCATGCCG CCGACTGGAC GGCGCAAACC TACGGGATTG CCCGTGAGCA GCAGGACAGC
TACGCCGCCG AGTCGCAGGC GCGCGCCGTT GCGGCGCAGG ATGCCGGGGC GTTTACCGAC
GAAATCGCGC CGTTCAGGTT GCAAAGCGGT GACATCCTGA CCACTGACGA ACCGCCCCGT
CGCGGCGTGA GTCTCGCCAC GCTCAGCAAA CTTTTGCCTG CCTTCTCACC GGATGGAACC
GTAACCGCTG GCAATGCCCC CGGTCTGACC GACGGCGCGG CTGCGCTGGT CGTCACCAGC
GCCCGACGTG CTGCCGAACT CGGCGTGCGC CCGCTGGCGC GGCTGACCGG CGTGGCGCAG
GCGGCAGTCG CGCCACGCGA GGTCTTCACC GCGCCGGTTT ATGCTATCCG TCGCCTGCTG
GCGCAAACCG CGACCACCCT CGACCATTAC GACCTGTTCG AGATCAACGA AGCATTCGCG
GCGCAGATCG TTCAGAACAT CCGCGCCCTG AACCTCGATA CCGACCGGTT GAATGTGCAC
GGCGGCGCAA TTGCCCTGGG GCACCCGATC GGCGCCAGCG GTGCGCGCAT TCTGGTGACG
CTCATCTACG CCCTGCTGCG TCGCGGCGGC GGGCGCGGCA TTGCTGCACT CTGCCTGGGT
GGGGGCGAAG CCGTGGCAGT GGCGGTCGAG GCAGCACCCT GA
 
Protein sequence
MPDTNDIVII GAARTPIGKF QGMFRAISAT DLGAHVVREA VARAAIDPSQ VDECILGNVV 
SAGLGQAPAR QAALRGGLPE SVGALTINKV CGSGLKAVTL AAALIRSGEA SLIVAGGMES
MSRAPYLLPQ ARSGYRLGNA ELIDSLIHDG LWCAFEHHHM GHAADWTAQT YGIAREQQDS
YAAESQARAV AAQDAGAFTD EIAPFRLQSG DILTTDEPPR RGVSLATLSK LLPAFSPDGT
VTAGNAPGLT DGAAALVVTS ARRAAELGVR PLARLTGVAQ AAVAPREVFT APVYAIRRLL
AQTATTLDHY DLFEINEAFA AQIVQNIRAL NLDTDRLNVH GGAIALGHPI GASGARILVT
LIYALLRRGG GRGIAALCLG GGEAVAVAVE AAP