| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3876 |
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| Symbol | |
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| ID | 5210858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4851486 |
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| End bp | 4854554 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640597471 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001278179 |
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| Protein GI | 148657974 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGATC AGCATAGTAT CTGGAAAGCG ATCTCTGTCT TGTTCTCCGC CCACTCCGAA
TCCTTGCGCG TTACAACGCT CAAGATTATT GCTATCGCGC TGGTCATCCT GCTGGCGTTG
CAGATCACCG TTTCCGAGTT CATCATCGGG CGCAGTTTCT ACGAACTCGA AGAACGCAGC
ACCCGCAGCG CCATGCAGCA AACGCTCAAA ACGCTCCAGA ACGAGATCAA TGTGCTGTAC
GGCAATGCGA AAGACTATGC TGTCTGGGAT CCCACCTACG AGTTCATCGA ACAACGTGAT
GTTGCCGGGT ATGTTGATGT TCACATGACG ACGGAAGCGT TGCTCGCCAT TCGCGTATCG
TATGTTGCGT TCGCCACTCC TGCCGGCGAG ATCATCTATA CCCGTCGCTT CGATCTGCGC
GACGGTCGTG ATCTGCCGAC GCCAGCGGAA TTTGCTTCGT TTGACGGCGA CAATGCGGTG
TTTTTGCGCA CCGCAGCGCA GACCGAAGGC ATCAGCGGCG TGGTCGTGGC GGATGGGCAA
CCAATGCTCA TTGCAGCCCA TCCAATCCTG CGCAGCACGG GTGCGAGCGA ACCGCGCGGC
GTGCTGATCC TGGGACGCGA CTTCAACGAC GATGAACTGG ATCATCTCAG CGATCTCACC
GGTTTCCCGG TCTCGTTCAC GCTGACCGCG AACGCCGCAG TTGCGCCAGA TTTCGATCTG
GCATACCGGT TGATGACTCC TGACACGCCG ATCATTGTGC GCCCGATGTC ATTCTCCGAC
GACCGGGTGT ACGCATACGC ACAGATCAAC GATCTGCGCG GCGGCGAGGG TATCATCCTC
CGCATCAACG CCCCGCGCGA TATTGTTCAG TATGGGCAGT CTTCATCACG CCTGTACATG
CTGATCATGC TGCTGGTCAT TGGCGCATTC GCCGCCGTCA TGATCCTGCT CCTGGAACGC
AACGTCCTGT CGCGCATCAT CGCCCTCAGT CTCCAGGCAG GGCGGATCGG GCGCACTGGC
GACGTGCAGG CGCGCCTGGC GGTGATCGGT AACGATGAGG TGGCGCAGCT CGGCAGAGCG
ATCAACGCCA TGCTCGACGA CATTGCACAG GCTGCCCGAC GCCTGGCGGA AAGTGAAGCG
CGCTACCGGC AACTGGTCGA AATATCCCCT GAAGCGATCA TCGTCCACGA CGGCAAACGG
ATCATCTACA CCAACCAGGC AGGTGCGCGC CTGGTTGGTC ACACCGACCC ATCGCAGTTG
ATCGGCGCTG ACGCCACACC CTTTTTGCCA CCCGCACTGC ACCTGGAAAC AGCAGAGGGA
GTCATGCGGT ATGAGCGCGA TCTTACCATC GCTGACGGAA CAGGCATATC CCTTGAACTT
GTCGCAGCCC CGTTCCTGGC TGAAGGTAAA CCCGCGTGGC AGATCGTTGC GCACAACATC
ACGGTGCGGA AGCAAACTGA GGAGGCGCTG CGACAGGCAA AAGAATGGGC GGAAGAGGCA
AACCGCACAA AAAGTCGCTT CCTGGCGAAT ATGAGCCACG AACTCCGCAC ACCACTGACG
ACGATTATCG GGTATGCCGA CCTGATTACG ATCTCTGTGC ACAGCGGGGA ATTCGATCAG
GTTGCCAGCG ATATTGCGCG GGTACGAGAT GCAGGAAAAC ACCTGCTGGC GATTATCAAC
GATCTGCTCG ATCTGTCGAA AATCGAAGCC GGACGGATGG AAATCCACAG CGAGCGATTT
TCGGTGCGTG CGCTTGCAGA AGAAGTGATT GCCAGCATGC GCGTATTTGC GCAGAAACGG
AACAATGATC TCACCTTGAA TATCGACCCG ACCGTCGAGA TGATGCACTC CGATGACGTG
CGCGTGCGGC AGATCCTGTA CAACCTGGTG CACAATGCGT GTAAATTTAC TGAAGATGGC
GCCGTGACTC TCGATATCGC CCGCACGGTG AGTGACCATG ATCACGCCGC ACTCCTCGTG
TTTACTATCA GCGATACCGG CATCGGGATG ACCGCCGATC AGATCGCCGG TCTGTTCCGT
GAGTTTACCC AGGCAGACTC ATCAACAACG CGCAAATACG GCGGAACTGG ACTGGGGCTT
GCGCTGTGTC GGCGCCTGAC TCATCTGCTT GGCGGTAAGA TCACGGTCAC CAGTCAGCCG
GGCGTTGGAA CGACATTTGT GGTCACACTT CCCGAACATC TGGCGTCTGC AACTGCATCC
GAGCCAGCGC CGGTCGATGC AGCGCCTGCA TCAGACACGC CGCCTGCTCC TGAATACAGT
GAGGACACCA GGCGTCTGGT GCTGTTGATC GACGATGATC CTGCTGTGCG CGATCTGCTG
CCGCGCATGC TGGAACGCCC CGATCTCCAT ATCGAGACTG CTGCGGACGG AACGAGCGGG
CTGGAACTGG CGCGCCTGCT CATGCCCGAC CTGATTATTC TGGACATCCT GATGCCGGAG
ATGGACGGGT GGACCGTGCT CCGTGAGTTG AAGGCGTCGA ACGAAACCGC TGCCATCCCT
GTTATACTAC TTACGATAGC AGACGACAGA GAACACGGGA TGCTTCTGGG AGCTGCCGAA
ATGATCCATA AACCGGCAGA CCTTGATCGG CTTGATCAGC GCATTCGTGC ATTAACCCGG
GGGCGATCGG CACAGGTGGA AGCCGGTAAC CAGCAGATTT TGATCGTTGA GGATGATGAG
ACAGTGCGCC AGTATCTCCG CCGCACTCTG GAGCGCGAAT GTGAAGACTG GATTATCATG
GAAGTCGCCG ACGGTCAGAC GGCGCTTGAA CGTTGCACAA CCGCCATGCC GGACGTTATT
GTGCTCGACC TTATGATCCC CGGTATCGAT GGCTTACAGT TCATCGAAGC ATTGCGCGCG
CTTCCCAATG GATGTTCGAC GCCAATTATC GTTGTCACTG CCCAGGATCT GACCGCTGAT
GAACGCGAGC GTCTCTGTCA CTCAGTCACC CGCATTCTCT ACAAGGGTTC CTTTCACTGC
CACGAATTCG CGCGCGAGGT GCGCGCAGCC ATTGCCACGT ATGCACAGTT ATACCCCCTG
GAGGTTTGA
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| Protein sequence | MIDQHSIWKA ISVLFSAHSE SLRVTTLKII AIALVILLAL QITVSEFIIG RSFYELEERS
TRSAMQQTLK TLQNEINVLY GNAKDYAVWD PTYEFIEQRD VAGYVDVHMT TEALLAIRVS
YVAFATPAGE IIYTRRFDLR DGRDLPTPAE FASFDGDNAV FLRTAAQTEG ISGVVVADGQ
PMLIAAHPIL RSTGASEPRG VLILGRDFND DELDHLSDLT GFPVSFTLTA NAAVAPDFDL
AYRLMTPDTP IIVRPMSFSD DRVYAYAQIN DLRGGEGIIL RINAPRDIVQ YGQSSSRLYM
LIMLLVIGAF AAVMILLLER NVLSRIIALS LQAGRIGRTG DVQARLAVIG NDEVAQLGRA
INAMLDDIAQ AARRLAESEA RYRQLVEISP EAIIVHDGKR IIYTNQAGAR LVGHTDPSQL
IGADATPFLP PALHLETAEG VMRYERDLTI ADGTGISLEL VAAPFLAEGK PAWQIVAHNI
TVRKQTEEAL RQAKEWAEEA NRTKSRFLAN MSHELRTPLT TIIGYADLIT ISVHSGEFDQ
VASDIARVRD AGKHLLAIIN DLLDLSKIEA GRMEIHSERF SVRALAEEVI ASMRVFAQKR
NNDLTLNIDP TVEMMHSDDV RVRQILYNLV HNACKFTEDG AVTLDIARTV SDHDHAALLV
FTISDTGIGM TADQIAGLFR EFTQADSSTT RKYGGTGLGL ALCRRLTHLL GGKITVTSQP
GVGTTFVVTL PEHLASATAS EPAPVDAAPA SDTPPAPEYS EDTRRLVLLI DDDPAVRDLL
PRMLERPDLH IETAADGTSG LELARLLMPD LIILDILMPE MDGWTVLREL KASNETAAIP
VILLTIADDR EHGMLLGAAE MIHKPADLDR LDQRIRALTR GRSAQVEAGN QQILIVEDDE
TVRQYLRRTL ERECEDWIIM EVADGQTALE RCTTAMPDVI VLDLMIPGID GLQFIEALRA
LPNGCSTPII VVTAQDLTAD ERERLCHSVT RILYKGSFHC HEFAREVRAA IATYAQLYPL
EV
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