Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3836 |
Symbol | |
ID | 5210818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4795349 |
End bp | 4796182 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597432 |
Product | phosphonoacetaldehyde hydrolase |
Protein accession | YP_001278140 |
Protein GI | 148657935 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01422] phosphonoacetaldehyde hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000103872 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCCCACTA TCGCTCGCCG CTATCGTGGC GCCATTGGCG CCATCATTCT CGACTGGGCA GGCACTGCCG TCGATTACGG CTCGTTTGCG CCGATCGCAG TGTTTCTACG CCTGTTTGCC GGTCATGGTG TTGTGATAAC ACCGGAAGAT GCGCGGGCAG GCATGGGATT GATGAAAAAA GACCACCTGC GCACCATCCT CGCCCGCCCG ACGGTCAGAT CTGCGTGGCA ATCGGTGCAT GGCGCACCAC CCTCGGAACC TGACATCGAT GGACTGTTCG AACAGTTTAT TCCGCTGCAA ACATCGGTCC TGAAAGAGTA CGCCGAACCA ATCCCCGGCA TGATCGAAGC CACAGTAGAA TTGCGCAAAC GCGGAATCAA GATCGGCTCG ACAACCGGCT ACCTGCGCGT CATGATGGCG ACCCTCGCCC CGATTGCTGC TGCGCACGGC TATCACCCCG ATTGCATCGT CTGCCCCGAT GATGTTCCTG CCGGACGCCC TGCGCCATGG ATGTGCTTTA TGAACGCCAT GCGCCTGGGA GTGTACCCCA TGGCTGCGCT GATCAAGGTC GGCGATACGC CTGTGGACAT CGAAGAGGGA TTGAACGCAG GAATGTGGAC GGTAGGAGTG ACGCTCACCG GGAGTCTGTT GGGAAAGACG CGCTCCGATG TGGAAGCGCT CTCCCCGCAG CAACGAGCGA GTATCCATGC GCAGATCGGT GAGCAACTCC TGGCAGCCGG AGCGCACCTG GTGATCGAAG GCGTTTGGGA TCTGCCCTGT GCCGTGCAAC AGATCGAAGA GCGCATGCTG CATGGGGAAA CGCCGCTGGC GTGA
|
Protein sequence | MPTIARRYRG AIGAIILDWA GTAVDYGSFA PIAVFLRLFA GHGVVITPED ARAGMGLMKK DHLRTILARP TVRSAWQSVH GAPPSEPDID GLFEQFIPLQ TSVLKEYAEP IPGMIEATVE LRKRGIKIGS TTGYLRVMMA TLAPIAAAHG YHPDCIVCPD DVPAGRPAPW MCFMNAMRLG VYPMAALIKV GDTPVDIEEG LNAGMWTVGV TLTGSLLGKT RSDVEALSPQ QRASIHAQIG EQLLAAGAHL VIEGVWDLPC AVQQIEERML HGETPLA
|
| |