Gene RoseRS_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3746 
Symbol 
ID5210728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4686485 
End bp4687450 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID640597342 
Producthypothetical protein 
Protein accessionYP_001278050 
Protein GI148657845 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.55082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000155287 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACCG CGACGCCACA ACCGGTTCCC CTCACCGACG ATGACGCCGA CCCGTTCCGC 
TACGGGTGGC GCCTCGTGCC GCGTCCCACC CCCGATAATC CCCATCACTT CGAACAGGTT
CCGCTCACCC TCGACGACGT GCTCCATCCT GAAGTGGGAG ACTTCATCGT GCACAGCGAT
TTCCACGAGA CCGACCGGAT GTATCTCACC GCCGTGCTGC GCGCGCGCCT GGAGCCGTCC
CGTCGGGCGA TTGTGCTCAG CGATGTGCGT ATCGCCTGGG ACATCCCCGA TCTGCGCGCG
CACGGACCGG ACGTGATGGT CATCCCCGGC GTGCGCAAAC GGCGCAACTG GAGCACGTTC
GAGGTCGTGG TCGAGCGAGC GCGCCCGGCG CTGATCATTG AGATCGTCTC GCCGGATGCG
CGCGAGAACG ATGTGGTGAT CAAAGTGGAG CATTACGCGC GGGCGGGGGT GGCGCAGTAC
GTGATTGTGG ACGATACGGG GCGCGGCGGG GTGCGGCGGT TGCGCCTGCT CGACTATCGT
CTGGAAGGTA CGGCATACCG GTTGCAGGAA CCGGACGCCG ACGGGCGGGT GCATCTGGCG
ATTGCCGACG TATGGCTCGG AATACGACGC GACCACGTGG TCTGCTATGA TGCGACGGGG
CGGGAGATCG GGGACTATGT GACGGTGGTG CGGCAGGCGG CGAAGGCGGA GGCACGGGCG
AAAGAAGCGG CAGCACGGGC GCGGCGCGAA GCAGCAGCGC GTGCCGAAGC GGAGGAGCGC
GCGCGGCAAG AAGCGGCGGC GCGGGAAGCC GAAGCGCGCG CGCGGATGGA GGCGGAAGAG
CGTGCGCAGC GTGAAGCGGC AGCGCGGGAA GCCGAAGCGC GGGCGCGGGC GGAAGCCGAA
GCGCGTCTGC GCGTGCTACG TGAGCGTCTG CGAGCGCTGG GGATTGAACC GGAGGATGAA
TTATAG
 
Protein sequence
MTTATPQPVP LTDDDADPFR YGWRLVPRPT PDNPHHFEQV PLTLDDVLHP EVGDFIVHSD 
FHETDRMYLT AVLRARLEPS RRAIVLSDVR IAWDIPDLRA HGPDVMVIPG VRKRRNWSTF
EVVVERARPA LIIEIVSPDA RENDVVIKVE HYARAGVAQY VIVDDTGRGG VRRLRLLDYR
LEGTAYRLQE PDADGRVHLA IADVWLGIRR DHVVCYDATG REIGDYVTVV RQAAKAEARA
KEAAARARRE AAARAEAEER ARQEAAAREA EARARMEAEE RAQREAAARE AEARARAEAE
ARLRVLRERL RALGIEPEDE L