Gene RoseRS_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3606 
Symbol 
ID5210584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4504970 
End bp4505686 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID640597199 
Producthydrolase 
Protein accessionYP_001277911 
Protein GI148657706 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.770692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA CCATCGCATT CGATGCCGAC GATACATTGT GGCACAATGA GACGCTCTAC 
TCCATAACCC AGGAGAAGTT CAAACGCCTG CTTGCCCCCT TTCAGGACGT CGCAACGATC
GACCGTCGAC TCTACGAAAC CGAGATGCGG AATCTGAAGT TCTTCGGGTA TGGCATCAAA
GGGTTCACCC TCTCCATGAT CGAGACCGCA ATCGAGGTGA CCGATGGTCG AATTGGCGCA
CAGGAGATTC ATCAGATCAT CGACTTTGCG CGCGATATGC TGCGCGCACC GGTCGAACTG
CTGCCCGGCG TGCGCGAAAC GATTGCGTCG CTGCGCGAAA CCTACCGATT GATGATCATT
ACCAAGGGAG ACCTGTTCGA TCAGGAGAGT AAAATTGCGC GCTCCGGCAT CGCCGAGTAT
TTTCAGCATA TCGAGATCGT GAGCGATAAG ACGCCAGCGA CGTATACAGC ACTTATGACA
CGCTTCGGCA TCCGACCAGA CGAGTTCTTA ATGGTTGGCA ATTCGCTGAA ATCTGATATT
CTACCGGTTA TCGCAGCAGG CGGGCGAGCG GTCTATATTC CGTATCACCT GACCTGGGAT
CACGAAAAGG TGACCGACGA CGAGGCGGCA ACCGACGGGT ATGTGCAGTT GTCGCATATT
GGCGAACTGC CGGGCTATCT GCGCAACTCC ATATGCGCGG CGCCGTTGTC GCACTGA
 
Protein sequence
MITTIAFDAD DTLWHNETLY SITQEKFKRL LAPFQDVATI DRRLYETEMR NLKFFGYGIK 
GFTLSMIETA IEVTDGRIGA QEIHQIIDFA RDMLRAPVEL LPGVRETIAS LRETYRLMII
TKGDLFDQES KIARSGIAEY FQHIEIVSDK TPATYTALMT RFGIRPDEFL MVGNSLKSDI
LPVIAAGGRA VYIPYHLTWD HEKVTDDEAA TDGYVQLSHI GELPGYLRNS ICAAPLSH