Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3606 |
Symbol | |
ID | 5210584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4504970 |
End bp | 4505686 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640597199 |
Product | hydrolase |
Protein accession | YP_001277911 |
Protein GI | 148657706 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.770692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.293085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCA CCATCGCATT CGATGCCGAC GATACATTGT GGCACAATGA GACGCTCTAC TCCATAACCC AGGAGAAGTT CAAACGCCTG CTTGCCCCCT TTCAGGACGT CGCAACGATC GACCGTCGAC TCTACGAAAC CGAGATGCGG AATCTGAAGT TCTTCGGGTA TGGCATCAAA GGGTTCACCC TCTCCATGAT CGAGACCGCA ATCGAGGTGA CCGATGGTCG AATTGGCGCA CAGGAGATTC ATCAGATCAT CGACTTTGCG CGCGATATGC TGCGCGCACC GGTCGAACTG CTGCCCGGCG TGCGCGAAAC GATTGCGTCG CTGCGCGAAA CCTACCGATT GATGATCATT ACCAAGGGAG ACCTGTTCGA TCAGGAGAGT AAAATTGCGC GCTCCGGCAT CGCCGAGTAT TTTCAGCATA TCGAGATCGT GAGCGATAAG ACGCCAGCGA CGTATACAGC ACTTATGACA CGCTTCGGCA TCCGACCAGA CGAGTTCTTA ATGGTTGGCA ATTCGCTGAA ATCTGATATT CTACCGGTTA TCGCAGCAGG CGGGCGAGCG GTCTATATTC CGTATCACCT GACCTGGGAT CACGAAAAGG TGACCGACGA CGAGGCGGCA ACCGACGGGT ATGTGCAGTT GTCGCATATT GGCGAACTGC CGGGCTATCT GCGCAACTCC ATATGCGCGG CGCCGTTGTC GCACTGA
|
Protein sequence | MITTIAFDAD DTLWHNETLY SITQEKFKRL LAPFQDVATI DRRLYETEMR NLKFFGYGIK GFTLSMIETA IEVTDGRIGA QEIHQIIDFA RDMLRAPVEL LPGVRETIAS LRETYRLMII TKGDLFDQES KIARSGIAEY FQHIEIVSDK TPATYTALMT RFGIRPDEFL MVGNSLKSDI LPVIAAGGRA VYIPYHLTWD HEKVTDDEAA TDGYVQLSHI GELPGYLRNS ICAAPLSH
|
| |