Gene RoseRS_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3574 
Symbol 
ID5210552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4470417 
End bp4471136 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID640597169 
Productiron dependent repressor 
Protein accessionYP_001277881 
Protein GI148657676 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.751623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGC GCATCGTGTA TCTGACGGGC GCCGACCGGA CTGACGGCGA TGAAGTAGCC 
GGGATTGAAC GCGCCTGTCT GGAGGTGATC GCCGGGTTGA GTGAACGGCG CGAGCCGGTG
ATGACCACGC ATGTGATCAA CCGGATGCGG AAGCAGTTCG CTCCACCGTC GCTCGTTCTC
GCCCTGCGTC GCCTGGAACA GAAGCGTCTG ATCACCTGCG ATGACACCGG TATGATCGGT
TTGACCGATG AGGGACACGT GGCCGGTATG CGCATCCTTC GCCGCCGTCG TCTTCTCGAA
CGCTTTCTCT TCGATACGCT CAAGGTTCCG TGGCACGAGG TGTACCGCGA GGCGAAACAC
CTCGAACCTC TCCTTTCAGC GGTGATGGAG GCGCGGATCG AGGCGCTGAC TGCTGATGCG
ACCACCTGCC CTTACGGTAA TCCGGTTCCG GGACGCAGCG ACGTATCGCC TGACGAGTGT
GTGCTCGTCA CAGCGCCGAT CAACGCCTGG TTCGTGGTAA CGCGTATCGA CGAAGAGGCA
GGCGAAGACA GTTGCGCGCT TCAGTTTCTC TGGACGCGCG GACTGCGCCC CGGCGTCCCG
CTCGTGCGTC GTCCCGACGC CTGCGATGGA CTGGTGGTGC AGCGCGCCGA CCGTCGGATC
GTGCTGTCGC GGCGGATGGC GCACTTTCTG TGGGGACGCA GCAAACGCTC CGAGGGGTGA
 
Protein sequence
MTSRIVYLTG ADRTDGDEVA GIERACLEVI AGLSERREPV MTTHVINRMR KQFAPPSLVL 
ALRRLEQKRL ITCDDTGMIG LTDEGHVAGM RILRRRRLLE RFLFDTLKVP WHEVYREAKH
LEPLLSAVME ARIEALTADA TTCPYGNPVP GRSDVSPDEC VLVTAPINAW FVVTRIDEEA
GEDSCALQFL WTRGLRPGVP LVRRPDACDG LVVQRADRRI VLSRRMAHFL WGRSKRSEG