Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3574 |
Symbol | |
ID | 5210552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4470417 |
End bp | 4471136 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640597169 |
Product | iron dependent repressor |
Protein accession | YP_001277881 |
Protein GI | 148657676 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.751623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGC GCATCGTGTA TCTGACGGGC GCCGACCGGA CTGACGGCGA TGAAGTAGCC GGGATTGAAC GCGCCTGTCT GGAGGTGATC GCCGGGTTGA GTGAACGGCG CGAGCCGGTG ATGACCACGC ATGTGATCAA CCGGATGCGG AAGCAGTTCG CTCCACCGTC GCTCGTTCTC GCCCTGCGTC GCCTGGAACA GAAGCGTCTG ATCACCTGCG ATGACACCGG TATGATCGGT TTGACCGATG AGGGACACGT GGCCGGTATG CGCATCCTTC GCCGCCGTCG TCTTCTCGAA CGCTTTCTCT TCGATACGCT CAAGGTTCCG TGGCACGAGG TGTACCGCGA GGCGAAACAC CTCGAACCTC TCCTTTCAGC GGTGATGGAG GCGCGGATCG AGGCGCTGAC TGCTGATGCG ACCACCTGCC CTTACGGTAA TCCGGTTCCG GGACGCAGCG ACGTATCGCC TGACGAGTGT GTGCTCGTCA CAGCGCCGAT CAACGCCTGG TTCGTGGTAA CGCGTATCGA CGAAGAGGCA GGCGAAGACA GTTGCGCGCT TCAGTTTCTC TGGACGCGCG GACTGCGCCC CGGCGTCCCG CTCGTGCGTC GTCCCGACGC CTGCGATGGA CTGGTGGTGC AGCGCGCCGA CCGTCGGATC GTGCTGTCGC GGCGGATGGC GCACTTTCTG TGGGGACGCA GCAAACGCTC CGAGGGGTGA
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Protein sequence | MTSRIVYLTG ADRTDGDEVA GIERACLEVI AGLSERREPV MTTHVINRMR KQFAPPSLVL ALRRLEQKRL ITCDDTGMIG LTDEGHVAGM RILRRRRLLE RFLFDTLKVP WHEVYREAKH LEPLLSAVME ARIEALTADA TTCPYGNPVP GRSDVSPDEC VLVTAPINAW FVVTRIDEEA GEDSCALQFL WTRGLRPGVP LVRRPDACDG LVVQRADRRI VLSRRMAHFL WGRSKRSEG
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