Gene RoseRS_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3546 
Symbol 
ID5210524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4444177 
End bp4444887 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID640597142 
Producthypothetical protein 
Protein accessionYP_001277854 
Protein GI148657649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAAC AGGGTTACCA GGAGTTTCTC TCCGCCGAAG GCGTCGCTGA CTGGGTTGTT 
CTGCATGGAG GCGCAACGGC TGTCTTTCGT GTCGGATCGC TTGGTGAAGC GGCGCGCCTG
GCAGGGTCGG TGGCGAACAT TCCCGGTCTC GAAGGCACAG GGGTGTTGTT GACGGTAGGG
GATGGTTTTC TTGCTGTTCG TCTGACGCGC GACCTCTGGC AATTGGCGCC ACGACACATC
GATCTCGCAC GGGCGATCTC GGCGGTCGCG CGAGCATCCA ATGCAGTCGC TGATCGTTCA
GCAGTCCAGG AGGTGCAGGT TGCAATCGCG GCGAAGCGTG ACGAGATAGA CGTTGACTTC
TGGCGCGCCG TGCTCGGTTA CCTGCCGATG GCGGATGACA ATGCGGTTGA CCCGCTCGGA
CATGGATCAA CGGTCTGGAT GCAGGAGATC GACGCGGGCA AGTCGTTGCG GCATGCGATG
CACATCGACG TGTCGGTCGC GCGCGAGCAG GCGGCGGTAC GGCTCCAGGC AGCGCTTGCT
GCGGGCGGAC GCATCGTCGA TGACTCCCGC GCACCGGCGT ACTGGACGCT CGCCGACCGC
GCCGGCAACC GTGTCTGTAT TGTCGCGTGG CCCGATGGTT CTGATCGGAA ACTGCCGGAA
GACGTAAGTG TTCACATTTC TCCTGGGAGC GATGGCATCT TACCGTCGTA G
 
Protein sequence
MDEQGYQEFL SAEGVADWVV LHGGATAVFR VGSLGEAARL AGSVANIPGL EGTGVLLTVG 
DGFLAVRLTR DLWQLAPRHI DLARAISAVA RASNAVADRS AVQEVQVAIA AKRDEIDVDF
WRAVLGYLPM ADDNAVDPLG HGSTVWMQEI DAGKSLRHAM HIDVSVAREQ AAVRLQAALA
AGGRIVDDSR APAYWTLADR AGNRVCIVAW PDGSDRKLPE DVSVHISPGS DGILPS