| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3531 |
|---|
| Symbol | |
|---|
| ID | 5210508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4423617 |
|---|
| End bp | 4425374 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597126 |
|---|
| Product | dynamin family protein |
|---|
| Protein accession | YP_001277839 |
|---|
| Protein GI | 148657634 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT TCCTTACCCG CCGCACCTTG CTGACCGAGC GCCAGGAAGC GTTGCTCGAA
GAGATCCGTG CGGCGCTAGC AGCGTTACGC ACTGCACTGC ACCGCTTTGG GGTCGATGTG
GCGCCGGGCG ATATGCGTAT TCTGGACGAT ACGATCACCC ATCTGGATGA ACTCTTTTTG
CTGGTGGTGG CGGGCGAATA CAACTCCGGC AAGTCGAGTT TCATCAATGC GCTGCTTGGC
GCGCCAGTGG TGGCGGAGGG TGTCACGCCC ACCACCGACC GGATCACCAT CCTGCGTTAC
GGCGATACGC CAGGTGAAAC GGTGAGCAGT GCGTTTCTGG TGGAGCATCG CTTCCCGGCT
GAGGTGCTGC GCCGTATGGC AATTGTCGAT ACGCCCGGTA CGAATGCCAT CATCCGACGC
CACGAAGAAC TGACGCACAA TTTCATCCCG CGCGCCGACC TGGTGCTGTT CGTAACGTCT
GCCGGTCAAC CGTTTTCCGC CAGCGAACGC GCCTTTCTGG AACTCATCCG CGATTGGGGG
AAGAAGGTGG TGCTGATTAT CAACAAAGCT GACCTGCTCG ACGATGCCGG TCTGGCGGAG
GTCGTCGCAT TTGTTGGCAG GCACGCTGAG GATTTGTTCG GCATGCGCCC CCGGATATTT
CCGGTCTCGG CGCGTCTGGC GCGTCAGGCG CGCGACACTG ATGATCAGGC GCTGTGGGAA
GCCAGTCGGT TTCCGGCTGT CGAGCAGTAC ATTGTCACCA CCCTTGATGA AGAGGAGCGG
GTGCGGTTGA AACTTCTCTC GCCGCTGGGT GTGGCGCGTC GGCTGGCAGA GCGATACCTG
CTCGCCGTCG AGGATCGTCT ATCCGCGTTG CGTGAGGATG TGGCTGCCAT CGACAACATC
GAGCGACAAC TCGACCTGTT CCGGCGCGAT CTGACCGAAG ATTTCGAGCG TCACCGGGCT
GAAGTCGCCA ACATTCTCAA CGAGTTCGAG TTGCGCGGCA TACGATTCTT CGACGAGACC
ATCCGCGTCA GCAACCTGTT CAACCTGGTG CGCCATCAGC AAGAGATCAG CGAGGCGTTT
GCGCGCGACA TCGTCGCCGA CGTGCCGCAG CAGATCGAAG CGCGTTTACA GGCGCTGATC
GACTGGATGG TGGAAAAGAA TCTGCGCATG TGGCAGGGAG TGATGGATTA TCTGCGGCGG
GAACGGGCGG TGCAACAACG CAGCGGATTG ATCGGCGAGA TTGGCGCAAC ATTCGAGTAC
AATCGAGCCG CGCTGATCGA ATCGGTCGCT CGTGAGGCGG AAAAGGTCAT TGCCACCTAC
GACCGCGAGG CTGAGGCGCA GGCGTTGACG GCGGAAGTGC AGGCGGCAAT CGCTGGCTCG
ACGCTGGTTG GGGCAGGCGC GGTGGGGATT GGAACGCTGC TCGTGCTGCT GTTGCACGGC
GCGATGCTCG ATGTCACGGG TGTGCTGGTT GCCGGGTTGC TGGCAGTTGG CGGGTTGTAC
CTGATTCCTA ACAAACGTCG CCAGATCAAG CGGCAGTTCC ATCAGCGCGT CGCCGACCTG
CACGAGACGC TCGCCGAAAC AATGGAACGC CAGTTCAACA CCGAATGCGA TCGTATGATC
ACACGCATCC GCGATGCCAT TGAACCCTAC ACCCGTTTCG TGTATGCACA GCACGAGCTC
CTGTTGACGA CTCAACGCGA TCTTTCTGAC ACGGAAGCGG AGATCAGTCG ATTACAGGCG
GAGATCGAAC GCCGTTGA
|
|---|
| Protein sequence | MTPFLTRRTL LTERQEALLE EIRAALAALR TALHRFGVDV APGDMRILDD TITHLDELFL
LVVAGEYNSG KSSFINALLG APVVAEGVTP TTDRITILRY GDTPGETVSS AFLVEHRFPA
EVLRRMAIVD TPGTNAIIRR HEELTHNFIP RADLVLFVTS AGQPFSASER AFLELIRDWG
KKVVLIINKA DLLDDAGLAE VVAFVGRHAE DLFGMRPRIF PVSARLARQA RDTDDQALWE
ASRFPAVEQY IVTTLDEEER VRLKLLSPLG VARRLAERYL LAVEDRLSAL REDVAAIDNI
ERQLDLFRRD LTEDFERHRA EVANILNEFE LRGIRFFDET IRVSNLFNLV RHQQEISEAF
ARDIVADVPQ QIEARLQALI DWMVEKNLRM WQGVMDYLRR ERAVQQRSGL IGEIGATFEY
NRAALIESVA REAEKVIATY DREAEAQALT AEVQAAIAGS TLVGAGAVGI GTLLVLLLHG
AMLDVTGVLV AGLLAVGGLY LIPNKRRQIK RQFHQRVADL HETLAETMER QFNTECDRMI
TRIRDAIEPY TRFVYAQHEL LLTTQRDLSD TEAEISRLQA EIERR
|
|---|
| |