Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3502 |
Symbol | |
ID | 5210479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4392903 |
End bp | 4393742 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597097 |
Product | CHAP domain-containing protein |
Protein accession | YP_001277810 |
Protein GI | 148657605 |
COG category | [R] General function prediction only |
COG ID | [COG3942] Surface antigen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA TCAAAGCCGA CACCGATGCG TTACGCGCAA CTATTGCCGC AATGCGGCAG GGAAGCAGCG CCATCGAGAA CGCCCTCCAG CAGGCGGCGC AGGCGATGGC GACGCTCCAG AACAGTCGCT GGTCCGGCAA TCACCAGCAG CAGGCGGAAG AGGTGTGGAC GCGCCTGCAG GCGCAGTTTG CGCCCACCAT CGAGGCATTG AACCAGATTG CGAACCGCAC CGAGCGTTTC ACCAACGCAC TTGAAGAGGC CGGGCGACAG TTTAACAACG GCGCCAGCAT ACCGCCTCCC GGCGCCGAAG CGCCGTCAAA ATCTCCTCAA CCGCATACTC CATCTCCAGG CAACCCTGAT GCAGGTACTG GCGGCTTTCC TCCCCACGCG CCGATTCCGC CCGGACCGAC AACCGTGCCG GGAGTTCTGG CAAACACCGC CGGTTGCACC AATTACGTGC TGCGCAGGCT CAACCTGAAC GATATGAAAC GCTGGCCCAA CGCACTCGAA TGGAACGAGG CGGCGACCAA TGCTGGCTAC GCGGTCGGCG TCAAACCAAA GAGCGGGTCA GTCATCGTAT TTGAGCCAGG AGTGATGGGG GCAGATAGAC AGGCGGGTCA CGTGGCGTAT GTCGAAGATG TCGTACAGAA CCGCGACGGC ACATTCAAGG TTACCATCAG CGAAGCCAAT GTCGTGTATC AAAACGGCGC TGTGGTGTGG GGAACCCACA CACCGCCCAC CAGACGCGAG ATTGTGTTCC GTCAAAACGG TGACGGCACC CTGACCGACA GTCGCGGGAA TCCGGTAAAC GTCAGTTTCA TCTATGGCAA AAAGGTGTGA
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Protein sequence | MSQIKADTDA LRATIAAMRQ GSSAIENALQ QAAQAMATLQ NSRWSGNHQQ QAEEVWTRLQ AQFAPTIEAL NQIANRTERF TNALEEAGRQ FNNGASIPPP GAEAPSKSPQ PHTPSPGNPD AGTGGFPPHA PIPPGPTTVP GVLANTAGCT NYVLRRLNLN DMKRWPNALE WNEAATNAGY AVGVKPKSGS VIVFEPGVMG ADRQAGHVAY VEDVVQNRDG TFKVTISEAN VVYQNGAVVW GTHTPPTRRE IVFRQNGDGT LTDSRGNPVN VSFIYGKKV
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