| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3502 |
|---|
| Symbol | |
|---|
| ID | 5210479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4392903 |
|---|
| End bp | 4393742 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597097 |
|---|
| Product | CHAP domain-containing protein |
|---|
| Protein accession | YP_001277810 |
|---|
| Protein GI | 148657605 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3942] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA TCAAAGCCGA CACCGATGCG TTACGCGCAA CTATTGCCGC AATGCGGCAG
GGAAGCAGCG CCATCGAGAA CGCCCTCCAG CAGGCGGCGC AGGCGATGGC GACGCTCCAG
AACAGTCGCT GGTCCGGCAA TCACCAGCAG CAGGCGGAAG AGGTGTGGAC GCGCCTGCAG
GCGCAGTTTG CGCCCACCAT CGAGGCATTG AACCAGATTG CGAACCGCAC CGAGCGTTTC
ACCAACGCAC TTGAAGAGGC CGGGCGACAG TTTAACAACG GCGCCAGCAT ACCGCCTCCC
GGCGCCGAAG CGCCGTCAAA ATCTCCTCAA CCGCATACTC CATCTCCAGG CAACCCTGAT
GCAGGTACTG GCGGCTTTCC TCCCCACGCG CCGATTCCGC CCGGACCGAC AACCGTGCCG
GGAGTTCTGG CAAACACCGC CGGTTGCACC AATTACGTGC TGCGCAGGCT CAACCTGAAC
GATATGAAAC GCTGGCCCAA CGCACTCGAA TGGAACGAGG CGGCGACCAA TGCTGGCTAC
GCGGTCGGCG TCAAACCAAA GAGCGGGTCA GTCATCGTAT TTGAGCCAGG AGTGATGGGG
GCAGATAGAC AGGCGGGTCA CGTGGCGTAT GTCGAAGATG TCGTACAGAA CCGCGACGGC
ACATTCAAGG TTACCATCAG CGAAGCCAAT GTCGTGTATC AAAACGGCGC TGTGGTGTGG
GGAACCCACA CACCGCCCAC CAGACGCGAG ATTGTGTTCC GTCAAAACGG TGACGGCACC
CTGACCGACA GTCGCGGGAA TCCGGTAAAC GTCAGTTTCA TCTATGGCAA AAAGGTGTGA
|
|---|
| Protein sequence | MSQIKADTDA LRATIAAMRQ GSSAIENALQ QAAQAMATLQ NSRWSGNHQQ QAEEVWTRLQ
AQFAPTIEAL NQIANRTERF TNALEEAGRQ FNNGASIPPP GAEAPSKSPQ PHTPSPGNPD
AGTGGFPPHA PIPPGPTTVP GVLANTAGCT NYVLRRLNLN DMKRWPNALE WNEAATNAGY
AVGVKPKSGS VIVFEPGVMG ADRQAGHVAY VEDVVQNRDG TFKVTISEAN VVYQNGAVVW
GTHTPPTRRE IVFRQNGDGT LTDSRGNPVN VSFIYGKKV
|
|---|
| |