Gene RoseRS_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3472 
Symbol 
ID5210449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4352698 
End bp4353981 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content65% 
IMG OID640597067 
Productglycosyl transferase, group 1 
Protein accessionYP_001277780 
Protein GI148657575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0837222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TGCTCCCAAC AGACGTTTTC CCCCCGCGTT GCGGCGGCGC TGGCTGGAGC 
GCGCATGCGC TGGCGCTGGC GTTGATTGCA CGCGGTCATA CGGTCACCGC GATTGTGCCG
CGTGAGGGAC AGGAGGGGAT ACGCACCGGT GACATCCTCG GCGTGCCGAC GGTGTTTGCC
GGTTATCGTG CGCCGCGCAT CCCGTTCGTG CGCAACTACG CACGCAACGA GCGCTTGTGG
CCCCATCTGG CGCAGGTGAT TATCGAGACC AGCACATCGC CCCCCTTTCA TCATCCGGCA
ACAATCATCC ATGCCCAGCA CGTCCAGGTG GCGCCATCCG CCGTCATTGC CGGGCGACGC
ATTGGCGCGC CGGTTGTCAT TAGCGTGCGC GATCACTGGC CCTGGGACTA CTTTGCGACC
GGATTGCACG GCGACCGCAT TCCCTACCCA CGTCAAACGT GGGCATCGCT TGCCACCGAT
CTGCCAGCGC GGTTGGGTCC GCTGCCCGGC GCGGTTGCGT TGCCCGCCAT TCCATACATG
CTGGCGCATC TTGCACATCG CCGCGCCGCG CTGCGCCAGG CGGACGCCGT GATCGCCGGC
AGTCGCTACA TTGCCGGACG CCTGGCGAAC CTGGTGACGT CAGAACGACT GCACATCATT
CCAAACATTG TCGATCTGGC GATGATCGAC GCTCAAATCG CCGCGCCGTC GGACCTGATT
CCGCCTGATG AGCGATTTGT CCTCTATGTC GGCAAACTCG AACGCAACAA AGGGGCGCAT
CTGCTGGGCG AGATCGTGCA ACAGGCAGGC GCTGCGCTCC ACCGTCACAC CCTCGTGATC
GCTGGCAGCG GACCGTTGCG CGCCGATCTC GAAGTAGCGA TGCGCGTGAG CCGGGTGCGC
GCCCGGTTTC TCGACTGGAT CGACCACAAC GACGTGCTGC GATTAATGGC GCGATGCGAT
CTGCTCCTCT TTCCTTCGGC ATGGGGGGAG CCGCTGAGTC GCGTCCTGCT GGAAGCATGC
GCCTGTGGCG CACCCATCCT GGCAATGCCC ACCGGCGGCA CGCCGGACAT TATCGTCGAC
GGCGAAAGCG GCGCGCTGGC GGCAACAGTG TCCAACTTTG CGCGTCGCCT GGCGGAACTG
CTCGAACGAC CCGCCGAGCG GCGCGCGCTT GGCGCCGGAG CGCGTCGTCG GGCGGAACAA
CGTTTTGCGC CTGATGTGGT CGCCGGGCAG GTGGAGCGTC TGTATCAATC GCTGAGAGAA
TCGGCGCGAC GTGCAGCCCC ATAA
 
Protein sequence
MNILLPTDVF PPRCGGAGWS AHALALALIA RGHTVTAIVP REGQEGIRTG DILGVPTVFA 
GYRAPRIPFV RNYARNERLW PHLAQVIIET STSPPFHHPA TIIHAQHVQV APSAVIAGRR
IGAPVVISVR DHWPWDYFAT GLHGDRIPYP RQTWASLATD LPARLGPLPG AVALPAIPYM
LAHLAHRRAA LRQADAVIAG SRYIAGRLAN LVTSERLHII PNIVDLAMID AQIAAPSDLI
PPDERFVLYV GKLERNKGAH LLGEIVQQAG AALHRHTLVI AGSGPLRADL EVAMRVSRVR
ARFLDWIDHN DVLRLMARCD LLLFPSAWGE PLSRVLLEAC ACGAPILAMP TGGTPDIIVD
GESGALAATV SNFARRLAEL LERPAERRAL GAGARRRAEQ RFAPDVVAGQ VERLYQSLRE
SARRAAP