Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3472 |
Symbol | |
ID | 5210449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4352698 |
End bp | 4353981 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640597067 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001277780 |
Protein GI | 148657575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0837222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC TGCTCCCAAC AGACGTTTTC CCCCCGCGTT GCGGCGGCGC TGGCTGGAGC GCGCATGCGC TGGCGCTGGC GTTGATTGCA CGCGGTCATA CGGTCACCGC GATTGTGCCG CGTGAGGGAC AGGAGGGGAT ACGCACCGGT GACATCCTCG GCGTGCCGAC GGTGTTTGCC GGTTATCGTG CGCCGCGCAT CCCGTTCGTG CGCAACTACG CACGCAACGA GCGCTTGTGG CCCCATCTGG CGCAGGTGAT TATCGAGACC AGCACATCGC CCCCCTTTCA TCATCCGGCA ACAATCATCC ATGCCCAGCA CGTCCAGGTG GCGCCATCCG CCGTCATTGC CGGGCGACGC ATTGGCGCGC CGGTTGTCAT TAGCGTGCGC GATCACTGGC CCTGGGACTA CTTTGCGACC GGATTGCACG GCGACCGCAT TCCCTACCCA CGTCAAACGT GGGCATCGCT TGCCACCGAT CTGCCAGCGC GGTTGGGTCC GCTGCCCGGC GCGGTTGCGT TGCCCGCCAT TCCATACATG CTGGCGCATC TTGCACATCG CCGCGCCGCG CTGCGCCAGG CGGACGCCGT GATCGCCGGC AGTCGCTACA TTGCCGGACG CCTGGCGAAC CTGGTGACGT CAGAACGACT GCACATCATT CCAAACATTG TCGATCTGGC GATGATCGAC GCTCAAATCG CCGCGCCGTC GGACCTGATT CCGCCTGATG AGCGATTTGT CCTCTATGTC GGCAAACTCG AACGCAACAA AGGGGCGCAT CTGCTGGGCG AGATCGTGCA ACAGGCAGGC GCTGCGCTCC ACCGTCACAC CCTCGTGATC GCTGGCAGCG GACCGTTGCG CGCCGATCTC GAAGTAGCGA TGCGCGTGAG CCGGGTGCGC GCCCGGTTTC TCGACTGGAT CGACCACAAC GACGTGCTGC GATTAATGGC GCGATGCGAT CTGCTCCTCT TTCCTTCGGC ATGGGGGGAG CCGCTGAGTC GCGTCCTGCT GGAAGCATGC GCCTGTGGCG CACCCATCCT GGCAATGCCC ACCGGCGGCA CGCCGGACAT TATCGTCGAC GGCGAAAGCG GCGCGCTGGC GGCAACAGTG TCCAACTTTG CGCGTCGCCT GGCGGAACTG CTCGAACGAC CCGCCGAGCG GCGCGCGCTT GGCGCCGGAG CGCGTCGTCG GGCGGAACAA CGTTTTGCGC CTGATGTGGT CGCCGGGCAG GTGGAGCGTC TGTATCAATC GCTGAGAGAA TCGGCGCGAC GTGCAGCCCC ATAA
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Protein sequence | MNILLPTDVF PPRCGGAGWS AHALALALIA RGHTVTAIVP REGQEGIRTG DILGVPTVFA GYRAPRIPFV RNYARNERLW PHLAQVIIET STSPPFHHPA TIIHAQHVQV APSAVIAGRR IGAPVVISVR DHWPWDYFAT GLHGDRIPYP RQTWASLATD LPARLGPLPG AVALPAIPYM LAHLAHRRAA LRQADAVIAG SRYIAGRLAN LVTSERLHII PNIVDLAMID AQIAAPSDLI PPDERFVLYV GKLERNKGAH LLGEIVQQAG AALHRHTLVI AGSGPLRADL EVAMRVSRVR ARFLDWIDHN DVLRLMARCD LLLFPSAWGE PLSRVLLEAC ACGAPILAMP TGGTPDIIVD GESGALAATV SNFARRLAEL LERPAERRAL GAGARRRAEQ RFAPDVVAGQ VERLYQSLRE SARRAAP
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