Gene RoseRS_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3405 
Symbol 
ID5210382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4278030 
End bp4278377 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID640597000 
Producthypothetical protein 
Protein accessionYP_001277713 
Protein GI148657508 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.952914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.525211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGC CGCCAGGTCT GACCTGTCGT GATGCCATCC GCGGCATGCC GCTGGCGTTC 
AACGCGCATG CCGCTGCTGG ATTGCGCGCG GTCATTCAGT TCCGTATCAC CGGCGCCGAA
CCGGGAGATT ACTACCTGCG CATCGCCGGG GGTGAATGTT TCTTCCACGA AGGCGTCTTC
GACAAACCAG ACGTCAGCAT TCATGCCCGT TCAGAGGTAT GGCTTGCGAT TGCCCACGGC
GAACTGGACG GCACACTGGC GTACCTGACA GGGCGTTATC GGGTTGAAGG CAACGTCTGG
CTGTTGATCC GCTTGAAATC GCTCTTTTCG GCGACCGGAA AAGCGTGA
 
Protein sequence
MEPPPGLTCR DAIRGMPLAF NAHAAAGLRA VIQFRITGAE PGDYYLRIAG GECFFHEGVF 
DKPDVSIHAR SEVWLAIAHG ELDGTLAYLT GRYRVEGNVW LLIRLKSLFS ATGKA