Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3405 |
Symbol | |
ID | 5210382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4278030 |
End bp | 4278377 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597000 |
Product | hypothetical protein |
Protein accession | YP_001277713 |
Protein GI | 148657508 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.952914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.525211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGC CGCCAGGTCT GACCTGTCGT GATGCCATCC GCGGCATGCC GCTGGCGTTC AACGCGCATG CCGCTGCTGG ATTGCGCGCG GTCATTCAGT TCCGTATCAC CGGCGCCGAA CCGGGAGATT ACTACCTGCG CATCGCCGGG GGTGAATGTT TCTTCCACGA AGGCGTCTTC GACAAACCAG ACGTCAGCAT TCATGCCCGT TCAGAGGTAT GGCTTGCGAT TGCCCACGGC GAACTGGACG GCACACTGGC GTACCTGACA GGGCGTTATC GGGTTGAAGG CAACGTCTGG CTGTTGATCC GCTTGAAATC GCTCTTTTCG GCGACCGGAA AAGCGTGA
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Protein sequence | MEPPPGLTCR DAIRGMPLAF NAHAAAGLRA VIQFRITGAE PGDYYLRIAG GECFFHEGVF DKPDVSIHAR SEVWLAIAHG ELDGTLAYLT GRYRVEGNVW LLIRLKSLFS ATGKA
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