Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3379 |
Symbol | |
ID | 5210356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4238984 |
End bp | 4242712 |
Gene Length | 3729 bp |
Protein Length | 1242 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596976 |
Product | protein kinase |
Protein accession | YP_001277689 |
Protein GI | 148657484 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.280356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000456668 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCGTCT CAACTTCCAC CCTCTTTTGC ATCATCTGCG GCCGCGAGTT CCGCCCGCGT GACGCGGACA CAGTCATCTG TCCCGACTGC GGCGGCCCGC CCGAAGCCCC TGCTCCCAGC CAGCCGCAAG GAACGGCGCT GGCCGACCAA CCGCGCGGCA CGGTGCTGAT GAGCCAACCC GCTTACCAGC GGATGTGCAT CCTCTGTGGC CAGGACTTCA CCACCCCCGA CCCGCAGGCC GACCGTTGCC CCCAATGCCG CGGCGAAGCG CCGCACCCCC AACCCGAAAT CCGCTCCCGA CCCGAAAGCC GCCAACGAAC ACCCGCCATG CCTGCCCCAG CCCAGGGAAC GGTTGCCATG CCCGAAAGCG GCATGTCGCC TGCCCCCTCA TCCGCCGATG TGCCGCTGAC ATGGAACGCG GGCGATGTCA TCCTGGACCT GTACGAAGTC AAGGGCGAAC TGGGAAAGGG CGGCATGGGC GTCGTCTATC GTGTCCATCA CCGCCAGTGG AACATTGACC TGGCCGTCAA AACGCCGCTG CCTGAGGCGC TGCAAAAGGC TGGCAGCCTG GAGAACTTTC TCCGCGAAGC GCAAGCCTGG GTGGACCTGG GCCTGCACCC GCACATCGTC ACCTGCTACT ACGTCCGCCG CCTGGGAGAA ATGCCGCGCG TCTTTGCTGA GTGCATGGAA GGCGGGAGTC TGAAGAACTG GATGGAGGAC GGGCGGCTGT ATGCTGGCGG CGAGCAAGAA GCACTGAAAC GCATCCTGGA CTGTGCCATT CAGTTTGCCT GGGGGCTGGG ATACGCCCAC GAGAAAGGCC TGGTGCATCA GGACGTCAAG CCAGCCAACG CCTTGATGAC GCCCGACGGG ATGCTCAAGG TGACCGACTT TGGGCTGGTG GGGGCGAAAG GGTACACGCC CGCCTATGCC GCGCCGGAGC AGGAACTGGG GCAGGCGGTC AGCCCGCGCA CCGACATCTG GGGCTGGGGC GTGAGCGTGC TGGAGATGTT CACGGGAGGG GTACACTGGC AATTCGGTTC CGTTGCGGCG AGTGTGCTGG AGAACTACCT GCAGGAGGCG CCGCCGGAGG GCATCCCGCC GATGCCTGCG GCGCTGGCAG AGTTGTTGCG CCAGTGCTTC CAGGACGACC CCGAGCAGCG CCCGGCGAGC ATGGACGAGG TAGCGGAGCG GTTGATGCGC CTTTACGAGC AGGAGACGGG CGCGCCCTAC CCGCGCCCGA AGCCCCAGGC GCTGGACATG CGGGCGGACA GTTTGAACAA CAAGGCGGTC AGTTTGCTCG ACCTGGGACT GGAAGAGGAA GCGGTGCGCT GCTGGCAGGA GGCGCTGCAG GCCGACCCCG CCCACCTGGA GGCGAATTTC AACTACGGGT ATTACCGCTG GCAGAGGGCC GAGGTGTTGG GCAGCGAGTT TCTCAAGCAG TTGCAAGGAC TGGAAGCCAC ACACGGCAGC AATCCCGAAT ACTGGCGGCT GCTGGCATGG GTGTATCTGG AGCAGGGGTA TGTGGAGGAA GTGGAGGAGA TTTTGGAGAA GCGCGGGGTG AAGGACGAAG CGCTCCGCCG CGCCCACACC GCGCCTGACC GCCCGGTGGG ACGGGAGGTG CACTGCTTCA AGGGGCACAC TGGTGTTGTG AACTCTGTCG CCTTTTCGCC CGATGGGCGC TACGCCCTGT CGGGAAGTTC CGATGGAACC GTGCGGCTAT GGGATGTGGC AAGCGGGAAG GAAGTGCGCA AGGTTCAAGG ATATGATGAG CTGGTGAGCG AGGTTGCTTT TTTAGCAAAT GGTCAAATCA TTATGGCAAG GAGTAAAGAT GGGGCTATAT TATGGGATAC AAGAACGGAC GAAGTGCATA GATACAAGGG AGGTAACCTT GAATTTTTTG ATGAAAGTGA ACGTTACGCA CTAGCGACGT GTGAGGATGG TAGCGTGCGG TTGTGGGATG TGACAACTAA ACAAGAAGTG CGTCGCTTCG GGAGACACGA TGGAACAGTG TACTCTGCTA CCTTTTCGCC TGATAAAAAT CATGTGCTAT CGGGAGGTGG AGATAATATT TTGCGGTTGT GGGAAGTAGA AACAGGAAAA GAAGTACGCC ACTTCGTCGG ACACTCTCAT TGGGTATTCT CTGTCACCTT TTCACCAGAT GGAGAATATG TGTTGTCAGG AAGTGGAGAT CAGACTGTAC GAATATGGGA GGTGAAGACT GGAAGAGAAT TACGTTGCTT TAGACATGAA GGAGCAGTGT TTTCTGTTGC CTTTTCACCA AATGGCCGCT ATGCACTGTC GAGCAGTCAT GACAGAACAA TAAGAGTATG GGAAGTATAT TATCCCTCGT TCCAGCTGAC CAGTATCAAG ATGCATCCTT TTCCTGTAAT TGCGCAATTT CGCGCTATAA ATCAACTCCA ACAAGAAGAT GTGTTGTTTG CCGAGCTATT AAGAATGGGA CAACAACATG TCAAAGAAAA GTCCTTTCTT AGAGCGCATG ATATCCTACG TCAAGCACAA GATGTGCCTG GTTACGAAAG AAATAAAGAC GTGCTCCAGT TTTTGACATT ATGTAGGGTA CAAGGCGGTG GTTATTGTCG TAACATCCGG AATGGATGGT GTGTGTATTG TTTAGATGAG CATACTGATA GTATTGCATC TGTTGCTTTT TCACCGGATG GACGCTACGC TCTGTCAGGA GGAGGCGATC GCGTTATAAG ATTATGGGAG ATAGAAAACG GACGTGTAAT CTGTAAACTT GAGGGACACA CCTTAGCTGT CTATTCAGTT GTCTTTTCAC CTGATGGACA CTACGCCTTG TCAGGAAGTT GGGATAAGAC CATTCGTTTG TGGGAAGTTG CAACAGGACG GGAAGTGAAT CGTTTTGATA GACATGTCAA CTTTGTGAAC TCCGTTGCTT TCTCACCGGA TGGACGCTAC ATTATTTCAG CAGGCTGGGA TGAAACCATT CGCCTATGGG ATACAACAAC GGGACATGAG ATGTATTGCT TGAAAGACAC TGATGTTATA TGGTCTGTCT GCTTCTCACC AGATGGACTC TATATCCTTT CGGGAAGTGA AGATGGTAGT GTGAAACTGT GGGATATCAA GACAAGGGAA GTAATACACC GCTTCACAGG CCTTAGTGAC AGAATACATT GTGTAGCTTT TTCACCAGAC GGACGCTATG CCCTATCAGG AAGTTCAGGT GGCATGGTGA TGATTTGGGA TGTGGGTACG AGGAGGGTTG TACATCAACT CAGTGTGAAC AATCGGTGGG TAACCCCAAC AACTTTCTCT CCAGATGGGC GCTATATCCT GATAGGAAGT GATGACGGAA CCCTGCAATT AGTGAATACG CAAGAGGGAA ATGCTGCTCG TGTTTTCAAA GGACATACTG ATTGGGTGTT CTCCATAGCC ATTTCCATTG ATGGGCAATA TGCTTTGTCG GGGAGCAAAG ACCAAACTAT CCGTGTCTGG GCCCTTGACT GGGACTACGA CTTCCCCGAT CCCGCCGACT GGGACGAGGG CGCGCGGCCG TATCTGGACA TCTTCCTCAC CCTGCACACC CCCTACGGTC GCGATGGCCT CAGCCGCGTC GGCAAGCCGC AGTGGACAGA GAAGGATTTC CAAAAGTTGT TGCAGGAACT CGGCTATCGC GGCTACGGCT GGCTGCGACC CGAAGGCGTG CGCCGCGAAC TGGAAAAGAT GGCGAAAGAA AGGAGTTGA
|
Protein sequence | MTVSTSTLFC IICGREFRPR DADTVICPDC GGPPEAPAPS QPQGTALADQ PRGTVLMSQP AYQRMCILCG QDFTTPDPQA DRCPQCRGEA PHPQPEIRSR PESRQRTPAM PAPAQGTVAM PESGMSPAPS SADVPLTWNA GDVILDLYEV KGELGKGGMG VVYRVHHRQW NIDLAVKTPL PEALQKAGSL ENFLREAQAW VDLGLHPHIV TCYYVRRLGE MPRVFAECME GGSLKNWMED GRLYAGGEQE ALKRILDCAI QFAWGLGYAH EKGLVHQDVK PANALMTPDG MLKVTDFGLV GAKGYTPAYA APEQELGQAV SPRTDIWGWG VSVLEMFTGG VHWQFGSVAA SVLENYLQEA PPEGIPPMPA ALAELLRQCF QDDPEQRPAS MDEVAERLMR LYEQETGAPY PRPKPQALDM RADSLNNKAV SLLDLGLEEE AVRCWQEALQ ADPAHLEANF NYGYYRWQRA EVLGSEFLKQ LQGLEATHGS NPEYWRLLAW VYLEQGYVEE VEEILEKRGV KDEALRRAHT APDRPVGREV HCFKGHTGVV NSVAFSPDGR YALSGSSDGT VRLWDVASGK EVRKVQGYDE LVSEVAFLAN GQIIMARSKD GAILWDTRTD EVHRYKGGNL EFFDESERYA LATCEDGSVR LWDVTTKQEV RRFGRHDGTV YSATFSPDKN HVLSGGGDNI LRLWEVETGK EVRHFVGHSH WVFSVTFSPD GEYVLSGSGD QTVRIWEVKT GRELRCFRHE GAVFSVAFSP NGRYALSSSH DRTIRVWEVY YPSFQLTSIK MHPFPVIAQF RAINQLQQED VLFAELLRMG QQHVKEKSFL RAHDILRQAQ DVPGYERNKD VLQFLTLCRV QGGGYCRNIR NGWCVYCLDE HTDSIASVAF SPDGRYALSG GGDRVIRLWE IENGRVICKL EGHTLAVYSV VFSPDGHYAL SGSWDKTIRL WEVATGREVN RFDRHVNFVN SVAFSPDGRY IISAGWDETI RLWDTTTGHE MYCLKDTDVI WSVCFSPDGL YILSGSEDGS VKLWDIKTRE VIHRFTGLSD RIHCVAFSPD GRYALSGSSG GMVMIWDVGT RRVVHQLSVN NRWVTPTTFS PDGRYILIGS DDGTLQLVNT QEGNAARVFK GHTDWVFSIA ISIDGQYALS GSKDQTIRVW ALDWDYDFPD PADWDEGARP YLDIFLTLHT PYGRDGLSRV GKPQWTEKDF QKLLQELGYR GYGWLRPEGV RRELEKMAKE RS
|
| |