| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3349 |
|---|
| Symbol | |
|---|
| ID | 5210326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4199767 |
|---|
| End bp | 4201056 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640596947 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_001277660 |
|---|
| Protein GI | 148657455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAG AACGAACACC GGAAACCGAT CGGTTGTATG AACAGGGTAT GGCGTGGATG
CGCGAAGCGC GCTGGGAAGA GGCAATCGCC GCTCTATCGC AGGTGCGCGC GCTGTCGCGC
GCCTACCCGG ATGTTGATGC GCTTATCGCC GATGCGCAGT TGAAACTGGA GATCGAGCAG
GTGGGCGTAC CTCCAGCATT GGCGCCGCCA CGTCCACATC CGCCGCGTGC AGCGCTGATC
GGCGGGTTGA CCGCGCTGAC ATTGATCGTT GCGGCGGTCA TTATCGCGCT GATCGGTCGA
ATCGACCCAT CGAGCGTCGG CAGTGCGGCG CAACCGATCA TGCTCAGCAT CGGCTTTCCA
ACCATTGCCC CTACCAGAAC GCCGACCCCT GCGCCGACCG CCACGCCAAT CCCGGTGCGC
CCAACTGCAA CGCCAGCGGC ATCTGTGGTC CTGCCTGGAA CGCTGGGAGT GCGCATGGCG
TCGGGAGAGC GATTACCCGG CGCCACCCGA AACCTGGCAA TCATTCTGGA CGCTTCCGGC
AGTATGCTGG CGCGCATCGA TGGTGCGCCC AAGACGGTGA TCGCTCGCCA GGCGCTGATT
GCGCTGGTTG AACGTCTGCC GGCAACCACG AATGTTGCAT TGCGCACCTA CGGTCATCGG
CGCGCCGACG ATTGCAGCGA TACCGAACTC GTTCAGGCGC CTGCCCCCAT CCAGCGCGCC
GATCTGATCA ACCGCATCAA CGCTATTCGA CCGGTCAACG GTGGACGCAC TCCTATAGCG
CAGTCGCTGG AAGATATGGC GCGAGACCTG GCTGGCGTCG ATGGCGAGGT GCTGATCGTG
CTGGTCAGCG ACGGTGATGA AACCTGTGGC GGCGACCCGG TTGCAACGGC GGCAGCGCTG
CACACCGCCA ATCCCCGTTT GCGGGTGAGT GTGATTGGGT TCAATATCGA ACAGGAAGAG
TGGCGCCGGC GCCTGGAAGG AATAGCCGCG TATGGCGGAG GGGCGTACTT CGATGCTGCG
AATGCCGTGC AACTCGCCGA TGCCCTCGAA CAGGCGGTTG CGCTGACTTA CCGTGTGATC
GACAGTCAGG GAAACCAGGT CTACCAGGGA CGGATCGGGA ACACGGTTAC CCTGCCACCC
GGCGCCTATC GTGTTGAAAT CAGCGGTGAT GCTGCGATAA CCTTTGAGAC AGTCTTTGTT
GAAAGTGGAC ACACCACATT TGTCGAACTG CGTGATGAAC AGGGGGCGTT GCGCGCCAGC
ATCATCGCGG GTGATGACGT AGCGCCGTGA
|
|---|
| Protein sequence | MNTERTPETD RLYEQGMAWM REARWEEAIA ALSQVRALSR AYPDVDALIA DAQLKLEIEQ
VGVPPALAPP RPHPPRAALI GGLTALTLIV AAVIIALIGR IDPSSVGSAA QPIMLSIGFP
TIAPTRTPTP APTATPIPVR PTATPAASVV LPGTLGVRMA SGERLPGATR NLAIILDASG
SMLARIDGAP KTVIARQALI ALVERLPATT NVALRTYGHR RADDCSDTEL VQAPAPIQRA
DLINRINAIR PVNGGRTPIA QSLEDMARDL AGVDGEVLIV LVSDGDETCG GDPVATAAAL
HTANPRLRVS VIGFNIEQEE WRRRLEGIAA YGGGAYFDAA NAVQLADALE QAVALTYRVI
DSQGNQVYQG RIGNTVTLPP GAYRVEISGD AAITFETVFV ESGHTTFVEL RDEQGALRAS
IIAGDDVAP
|
|---|
| |