| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3341 |
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| Symbol | |
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| ID | 5210318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4190627 |
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| End bp | 4192081 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596939 |
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| Product | fumarate lyase |
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| Protein accession | YP_001277652 |
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| Protein GI | 148657447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.611164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG CATTCCGCAT CGAGAAGGAC TCGCTCGGCG AAGTGAGGGT GCCAGCGAAC
GCACTCTATG GAGCACAAAC GCAACGCGCC GTGATGAACT TTCCGGTCAG TGGCATGCGT
CCATACCCGG CATTCGTCTG GGCGCAGGCG ATGATCAAGC GCGCTGCGGC GGAAGTCAAC
CGCGACCTGG GACTGTTCAA CGACGTCACG ATTGGCGACC GCACCATCAG CGGGCGACAG
ATCGCCGATG CGATCATCCA GGCGGCGGAC GAAGTGCTCG ATGGGCAGCA TGCCGACCAA
TTCGTCGTTG ACCCCTTCCA GGCTGGCGCA GGCACCAGCC ATAACATGAA CCTTAACGAG
GTGATTGCCA ATCGCGCGAA CCAGATCCTG GGCTTTGCGC TCGACGATCC GAAGAAGCCG
GTCAGCCCGA ACGACCACGT CAACATGGCG CAGAGCACCA ACGACACTAT TCCAACCGCT
ATCCGCCTTG GCTGCCTCTG GCGTCTCGAC GAACTGCTTG CCGCTATTGA TCGGCTTGCT
GATGCGCTCG AAGCCAAGGC GCAGGAGTTC GATCCGATCG TCAAATCGGG ACGTACCCAC
TTGCAGGATG CCGTACCGGT GCGATTGGGG CAGGAGTTTG GCGCGTATGC GCTGGCGGTG
CGCAATGATC GTGAGCGGAT CGAGAGCGCT GCCGACCGGT TGCGCCGGTT GGGTATTGGC
GGCACAGCCG TGGGTAGTGG GTTGAATGCG CATCCCGAAT ACCACGGGCG AATGGTCAAA
CGCCTGTCGG AGTTGACCGG TCAGGAACTG CGCTCGGCGG GCAATCTGTT CGAGGCGATG
CAGAGTATGG CGGATCCGGC GGATTTCTCA GCGTCATTGC GCACGCTGTG CATTACGCTG
ACCCGTATCG CCAATGATCT CCGTCTGCTT GCATCAGGAC CAACGACCGG TCTGGATGAG
ATCCGACTGC CGGCGGTTCA ACCCGGTTCG AGCATTATGC CCGGTAAAGT CAATCCGGTA
CTGGCGGAAA TGCTGAACAT GGCGTGCTTC CATGTGCAGG GATGCGATCT GACCGTTTCG
CTTGCGGCGC AAGCCGGGCA ACTCGAATTG AATGTGATGA TGCCGATCAT CGCCCACAAC
CTGTTCGAGA TGATGCACGT CCTCATTGGC GCTATCAATG CCTTCACCGA GAAGTGCGTG
GTTGGCATTA CCGCCAACCC CGAAAAGGCG ACCGGATGGC TGGCAAAGAA TCCGATCCTG
GTGACGGCGT TGAATCCGGT GATCGGATAC CTCAACGGCG CTGCAGTCGC CAAAGAAGCG
CTGGCAAGCG GCAAGACGAT CAAGGAGGTG GTGGTCGAGA AGGGTCTCCT CTCACCGGAA
CAGGTCGATG AACTGCTCGA TGTACGCGCC ATGACCGAAG GCGGCATTAT GGGCATCGGC
GGCGGCGGCG GGTAA
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| Protein sequence | MSEAFRIEKD SLGEVRVPAN ALYGAQTQRA VMNFPVSGMR PYPAFVWAQA MIKRAAAEVN
RDLGLFNDVT IGDRTISGRQ IADAIIQAAD EVLDGQHADQ FVVDPFQAGA GTSHNMNLNE
VIANRANQIL GFALDDPKKP VSPNDHVNMA QSTNDTIPTA IRLGCLWRLD ELLAAIDRLA
DALEAKAQEF DPIVKSGRTH LQDAVPVRLG QEFGAYALAV RNDRERIESA ADRLRRLGIG
GTAVGSGLNA HPEYHGRMVK RLSELTGQEL RSAGNLFEAM QSMADPADFS ASLRTLCITL
TRIANDLRLL ASGPTTGLDE IRLPAVQPGS SIMPGKVNPV LAEMLNMACF HVQGCDLTVS
LAAQAGQLEL NVMMPIIAHN LFEMMHVLIG AINAFTEKCV VGITANPEKA TGWLAKNPIL
VTALNPVIGY LNGAAVAKEA LASGKTIKEV VVEKGLLSPE QVDELLDVRA MTEGGIMGIG
GGGG
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