Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3314 |
Symbol | |
ID | 5210289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4164104 |
End bp | 4164601 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596910 |
Product | hypothetical protein |
Protein accession | YP_001277625 |
Protein GI | 148657420 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCTGC TGATCGATGG ACACAACCTG ATTGCGCAGA TGCCGGGACT ACGCCTGTCC GACATTGACG ATGAAGCGCA ACTGGTCATG CTGCTGCGAC GCTACGCTGC AGCACGACGA GGAAGGAGCA TCACCGTTGT GTTCGACCAC GGCGTCTACG GTCACTCGCA ACGCCTCGAC GGATATGGCG TCACCTGCTC TTTTGCGCGG TCACCGCACG ACGCGGACAC GCAACTGATC CGCCGGATCA CAACCATTGC ACGCCCGCAT GAGTGGACGG TCGTCACCTC GGATCGTCAG GTGGCGCAGG CGGCGGCAGC GCGCGGCATC AAGGTGATCG ATTCGCGCAC CTTCGCTCAA ACCTTGCAGC AACTGACAAC CCCCGCCCCT CGTCAATCAT CGGCGGGCGC CGACAAGCCG GAGCGCCTGC CGGATCAGTC GGAAGTTGAT GAATGGTTGC GTCTATTCGG AGAAGAGGAA CAGGATAACC CCGCATAA
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Protein sequence | MPLLIDGHNL IAQMPGLRLS DIDDEAQLVM LLRRYAAARR GRSITVVFDH GVYGHSQRLD GYGVTCSFAR SPHDADTQLI RRITTIARPH EWTVVTSDRQ VAQAAAARGI KVIDSRTFAQ TLQQLTTPAP RQSSAGADKP ERLPDQSEVD EWLRLFGEEE QDNPA
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