Gene RoseRS_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3314 
Symbol 
ID5210289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4164104 
End bp4164601 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID640596910 
Producthypothetical protein 
Protein accessionYP_001277625 
Protein GI148657420 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGC TGATCGATGG ACACAACCTG ATTGCGCAGA TGCCGGGACT ACGCCTGTCC 
GACATTGACG ATGAAGCGCA ACTGGTCATG CTGCTGCGAC GCTACGCTGC AGCACGACGA
GGAAGGAGCA TCACCGTTGT GTTCGACCAC GGCGTCTACG GTCACTCGCA ACGCCTCGAC
GGATATGGCG TCACCTGCTC TTTTGCGCGG TCACCGCACG ACGCGGACAC GCAACTGATC
CGCCGGATCA CAACCATTGC ACGCCCGCAT GAGTGGACGG TCGTCACCTC GGATCGTCAG
GTGGCGCAGG CGGCGGCAGC GCGCGGCATC AAGGTGATCG ATTCGCGCAC CTTCGCTCAA
ACCTTGCAGC AACTGACAAC CCCCGCCCCT CGTCAATCAT CGGCGGGCGC CGACAAGCCG
GAGCGCCTGC CGGATCAGTC GGAAGTTGAT GAATGGTTGC GTCTATTCGG AGAAGAGGAA
CAGGATAACC CCGCATAA
 
Protein sequence
MPLLIDGHNL IAQMPGLRLS DIDDEAQLVM LLRRYAAARR GRSITVVFDH GVYGHSQRLD 
GYGVTCSFAR SPHDADTQLI RRITTIARPH EWTVVTSDRQ VAQAAAARGI KVIDSRTFAQ
TLQQLTTPAP RQSSAGADKP ERLPDQSEVD EWLRLFGEEE QDNPA